Trifolium pratense (red clover): 123908317
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Entry
123908317 CDS
T08949
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123908317
00071 Fatty acid degradation
123908317
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123908317
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123908317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123908317
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123908317
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123908317
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123908317
Exosomal proteins of breast cancer cells
123908317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123908317
NCBI-ProteinID:
XP_045814881
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All DBs
Position
LG2:complement(51375013..51383551)
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AA seq
717 aa
AA seq
DB search
MSAIPFIFSFNALPRTNFTRSINVSPTRSFRVLCKSQSKTQKTNITRRFSPLLESSLLSH
NGDGGGVGVASDQWKAVPDIWRTSADKFGDKIALIDPYHHPPSTITYKQLEDAILDFSEG
LRVIGVHPDEKIALFADNSCRWLVADQGMMASGAINVVRGSRSSIEELLQIYNHSESVAL
AVDNPEMFNRIAKAFNLKASMRFIILLWGEKSNLVNEGNKEVPIFTFTEVINFGKESRRS
LFESHNARKHYVFEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKFYSDIVPAEVG
DRFLSMLPPWHAYERACEYFIFSRGVDQVYTTVRNLKDDLGHYQPHYLISVPLVYESLYS
GIQRQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLIKNQKSPSYLYAMLDWLWARI
IATILFPIHMLAKKLVYSKIHSAIGISKAGISGGGSLPSHVDKFFEAIGVKLQNGYGLTE
TSPVIAARRLSCNVIGSVGHPLKHTEFKVVDSETGEVLPPGYKGILKVKGPQLMKGYYKN
PSATNQVIDRDGWLNTGDIGWIVPYHSIGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGE
LEEAAMRSSLIQQIVVVGQDKRRLGAVVVPNKEEVLKAARELSIIDSNSSDASQEKVTSL
IYNELKTWTSEFQFQIGPILLVNDPFTVDNGLMTPTMKVRRDRVIAQYRDQIENLYK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgattcctttcatcttcagtttcaacgctcttcctcgcaccaacttcaccaga
tcaatcaacgtttctccaactcgttcttttcgcgtcttatgcaaatctcaatccaagaca
cagaaaacgaacataacaagaaggttttctcctttattagaaagttcattgctttctcat
aatggtgatggtggtggtgtcggtgtggcttcagatcagtggaaagcagttcctgatatt
tggagaacttctgctgacaaatttggtgataaaattgctctcatagatccatatcatcat
cctccttcaactatcacatacaaacagttggaggatgcaatattggatttttctgagggc
ttgagagttattggagtacatcctgatgagaagattgcactttttgccgataattcatgt
cgctggcttgtggcagatcaaggtatgatggcgagtggagcaatcaatgttgttaggggt
tcaaggtcatcaattgaagaactgctgcaaatatacaaccactctgaaagtgttgcacta
gctgtggataatccagaaatgtttaaccggattgcaaaagcgtttaatttgaaggcttca
atgagatttattattcttctgtggggagaaaaatcaaacctggtcaatgaaggaaacaag
gaagtgccaatctttacattcacggaagtcataaattttggaaaagagagccgcaggtca
ttgtttgagtctcataatgctaggaagcactatgtgtttgaagcaataaaatctgacgac
attgctacccttgtatacacaagtggaactactggaaatccaaaaggtgttatgctaact
catcagaatcttttgcatcagattaaattttattcggacattgtacctgctgaagttggg
gacagatttctaagcatgctgcctccttggcatgcatatgaaagagcttgtgagtatttc
attttctcacgcggtgttgaccaagtatatacaactgtgagaaacttgaaggatgatttg
ggacattaccagccgcattacttgatttctgttcctttagtttatgagtctttgtacagt
gggatccagaggcagatttctacaagctcccttgttagaaagcttgttgcactgacattt
ataagggtcagcttagggtacatggaatgtaagcgaatttatgagggtaaatgtttgata
aagaatcagaagtcgccttcctatctctatgcaatgttggattggttatgggcaagaatt
attgccacaatattatttcctattcatatgctggcaaagaaacttgtctacagtaaaatc
cattcagctattggaatttcaaaggctggaataagtggtggtggtagcttaccttctcac
gtcgacaagttttttgaggctattggtgtgaaattgcagaatggatatggtttaacagaa
acttcacctgttattgctgctcgacgacttagttgcaatgttattggatctgtcgggcat
ccacttaagcatacagaattcaaagttgtagattctgaaactggtgaagttcttccacct
ggctataaggggattttaaaagtcaagggcccacaattgatgaagggatactacaagaat
ccttcagctacaaatcaggtcatagatagggatggctggctgaatactggtgacataggt
tggattgttccataccattcaattgggcggagtcggaattctggtggtgtgattgttgtt
gaaggccgtgctaaagacaccattgttctttcatcaggtgaaaatgtcgaaccgggagaa
cttgaagaagctgcaatgagaagtagcctcatacaacaaattgttgtcgttggccaggat
aagcgacgtctaggagctgtagtagttcctaacaaagaagaagtcttaaaggcagcgagg
gaattatcgattatagattccaatagttcagatgccagtcaggaaaaagtgaccagttta
atatataatgaattaaagacctggacgtctgagtttcaatttcaaatcgggccaatcctt
cttgtaaatgatcccttcacggttgataatgggctaatgacacccacgatgaaggttcga
agggatagagttatcgctcaatacagggaccaaatagagaatctatacaagtaa
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