Trifolium pratense (red clover): 123908458
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Entry
123908458 CDS
T08949
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123908458
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123908458
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Topoisomerases
123908458
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
123908458
NCBI-ProteinID:
XP_045815061
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Position
LG1:complement(31503001..31512924)
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AA seq
884 aa
AA seq
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MSRKFDDDDGPVTFKRSSVSKSTQSHSEVRKSTSHSNDGRSYRKSSDVPSSNGHNSSSQN
GKLVPCAKASAVESSVGISKASTSMVYVRSPRGISKFSSFENKKESLLEKKIPVHVNEEN
KEDSEDEVENMPLSVRMKMNNINAKKATPIVPKKSSENSDDDIPLSSRLSLSKAPKGQQY
GSNASVKQERPSTLSVKRPLDKSDSLHFSGKKSKLSDPAQSINAKQISAKSEPKVEEEDD
NDDVPLSQRMNKLPTLVDKSSSLKKLTNVTKVNKGATPSFKKKANFKKSGNKSEQFKSTK
LPPSSEDGQKKWTTLVHNGIIFPPPYKPHGIKILYKGKPVTLTPEQEEVATLYAVMLDTD
YMQKQKFKENFWTDWKKMLGKNHVIQNLEDCDFTPIYDWCQIEKEKKKQMSSKEKKALRE
EKLKQEEKYMWAIIDGVKEKVGNFRAEPPALFRGRGEHPKMGKLKRRITPNDVVINIGKD
APIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKLFKYIFLGASSSWKGQSDREKYEKA
RMLKNYIGNIRAAYTKDFASKDITKQQIAVATYFIDKLALRAGNDKDDDEADTVGCCTLK
VENVTAEGNNKLKFDFLGKDSIRYENTVEVLLPVYNAILKFQKGRKMVLLFDIVLLMSPR
PLTLNICFSELSDKRPGDQLFDKLDTTILNNHLKELMPNLTAKFFRTFNASFTLDDMLNK
ETKDGEDVKANILVYQNANKQVAIICNHQRSVSKSHSGQISKLSEKIEEHKALLKELKID
LDRARKGKPPLKGSDGKNKRNLSPEAIEKKIDQTDAKIEKMQSDMMTKEDLKTVALGTSR
INYLDPRITVAWCKRHEVPIEKIFSKTLLEKFAWALDVDPDFRF
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaaatttgatgacgatgatgggccagtaacttttaaaaggagctcagtgtcg
aagagtactcaatcgcattcagaagtgaggaagtcaacttctcatagtaatgatggacgg
tcatatagaaagtcctctgatgtgccttcatcaaatggccacaattctagctcacaaaat
ggtaagcttgtcccatgcgctaaggcatctgccgtggaatcttctgtgggtatatcaaaa
gcatcaacgtcaatggtctatgtgaggtcccctagaggaatttcaaaattttcatcattc
gaaaataaaaaagagtctcttttagaaaagaaaattcccgttcatgttaatgaggaaaat
aaagaagattctgaggacgaggtggaaaatatgccattgagtgttaggatgaagatgaac
aatatcaatgctaagaaagcaactcctattgttccaaagaaatcttctgaaaactctgat
gatgatattcccctgtcatcaaggctttcactttcaaaagctccgaaaggacagcaatat
ggttccaatgctagtgttaaacaggaaaggccatctacattgtctgttaagagaccactg
gataagagtgattccttgcatttttctggcaagaagtcaaaactctcagatccagctcaa
tcaattaatgctaaacaaatatcagcgaaatctgagccgaaggttgaggaggaagatgat
aatgatgatgttcctctttcccaacgaatgaataagttacccacattagtggataaatca
tcttccttaaagaagttgacaaatgtcactaaagtcaataagggtgctactccatctttt
aagaagaaggccaatttcaaaaaatcaggaaataaatcagaacaattcaaatctactaaa
cttcctccaagctctgaagatgggcagaaaaaatggactactttggttcacaatggtatc
atcttcccacctccttacaagccccatgggataaagattctctataagggaaagccagtg
actttgacccctgaacaagaggaggtcgccacattgtatgctgtcatgctggatacagat
tacatgcaaaaacaaaagttcaaggagaatttttggactgactggaagaagatgctggga
aaaaatcatgtgattcagaacttggaagattgtgactttacaccgatttatgattggtgc
caaattgaaaaggagaagaagaaacagatgagttcaaaggagaagaaggccctaagggaa
gagaaactgaaacaagaggagaaatacatgtgggctattattgatggtgttaaagagaag
gttggcaattttagagctgaacctccagcgttgttccgtggacgtggagagcatcccaag
atgggcaaactgaaaagacgcatcactccaaatgatgtcgtaattaatattggaaaggat
gcaccaatccctgaatgtcctattcctggtgaaagctggaaggagataagacatgataat
acagttacttggttagcctactggaatgatccaatcaatccgaagttattcaaatacata
tttctgggagctagtagttcttggaaggggcaaagtgacagggaaaaatatgagaaagca
aggatgttaaagaattatatagggaacattagggctgcatatacgaaagatttcgcgagc
aaagatattacgaagcagcaaatagctgttgctacttattttattgacaaactagctttg
agggctggcaatgataaggacgacgatgaagctgatacagttggttgttgcacattaaaa
gtagaaaatgtgactgcagaaggcaacaacaagttgaagtttgacttccttggtaaagat
tcaatcaggtatgaaaatacagttgaggtgttgcttcctgtttataatgccattttgaag
tttcaaaaaggtaggaaaatggttctactttttgatatagtattgcttatgagtccgagg
ccattaacattgaatatctgcttttctgaattatcagataaacgtcctggtgatcaactt
tttgacaagctggatacaactatattaaataatcatttgaaggaactcatgcccaacctg
acagcaaaattcttccgtacattcaatgcatcgttcactttggatgacatgttgaataag
gaaactaaagatggagaagatgttaaagcaaacattcttgtctatcaaaatgcaaataaa
caggttgcaattatttgtaatcatcaacgtagtgtttcaaaatctcacagtggacaaatt
tcgaagttgagtgaaaagatcgaagaacataaggctcttttgaaggagctgaaaatagac
ttggacagggcaagaaaaggaaagccgcctctaaagggttcggacggaaaaaacaaaagg
aacttgagtcctgaagcgatagagaaaaagatagatcaaaccgatgcaaaaattgagaaa
atgcaaagtgatatgatgacaaaagaagatttaaaaactgtggcacttggcacgtccagg
ataaactacctagatcccaggataacagtcgcctggtgcaagcggcacgaagttcctatt
gaaaagattttcagtaaaactctgctggaaaaatttgcttgggcattggatgtagatcct
gatttcagattctga
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