Trifolium pratense (red clover): 123908500
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Entry
123908500 CDS
T08949
Name
(RefSeq) ATP-dependent RNA helicase eIF4A isoform X1
KO
K03257
translation initiation factor 4A
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123908500
03012 Translation factors [BR:
tpra03012
]
123908500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123908500
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123908500
mRNA cycle factors
Stress granule specific factors
123908500
Translation factors [BR:
tpra03012
]
Eukaryotic type
Initiation factors
eIF-4
123908500
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123908500
Exosomal proteins of bladder cancer cells
123908500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Motif
Other DBs
NCBI-GeneID:
123908500
NCBI-ProteinID:
XP_045815110
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Position
LG2:10497518..10501016
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AA seq
215 aa
AA seq
DB search
MAMDNSIDTPSSPSQSQYQYQIGHPRHFYLAVDRLQFKMQTLVDLLDLVGRRSCLPIVVC
CSTRDDLDSLCSSLSPLPFISSSALYSDLAEDERAFVLEKFCQVTTRWNQISHAGAGNED
DIGKDDRSHVIIVTDACLPLLTSGESPMNAHLLINYELPAKKETYGRRLASCLTADGIVI
NMVVGGEVVTLKSIEESAGIVMPEMPMQVSPKKII
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccatggataatagcatcgatactccgtcttctccttctcagtctcagtatcaatat
caaattggtcacccgcgtcatttctatcttgcagtagacagactccaattcaaaatgcaa
acgttggttgatcttcttgatttggttggtcggcgttcttgtttgcccattgttgtctgt
tgcagcactcgtgatgaccttgactctctctgctcttctctttcacctctccctttcatt
tcatcttctgctttgtacagtgaccttgctgaagatgaacgagcttttgttttagagaaa
ttttgtcaagtgacaacgagatggaatcagattagtcatgctggagcagggaatgaagat
gatattgggaaagatgatagatctcatgtgattattgtgactgatgcttgccttcctctt
cttacctctggggagtctcccatgaatgctcatcttctcattaactacgagttaccggcg
aaaaaggaaacatacggaaggcgcttggcttcttgtttaacagctgatggaattgttatc
aatatggttgttggtggggaagtggtaactctaaaaagtatcgaagaaagtgccggcatt
gtcatgccagagatgccaatgcaagtaagtccaaagaagataatatag
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