Trifolium pratense (red clover): 123908562
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Entry
123908562 CDS
T08949
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123908562
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123908562
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123908562
NCBI-ProteinID:
XP_045815190
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Position
LG2:4448766..4451084
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AA seq
444 aa
AA seq
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MGKIMVQSSTKGLFIFLVTFAITIPCLEAGIGEFDDFLKAEEEEAHKIALDSYIPVPEEV
VHDLNVDVHLAMEEANDTRRELKENHNEGPCESSNPIDNCWRCKADWAENRYRLSKCGKG
FGRKAVGGLGGPIYVVTDESDGDMVNPKPGTLRYGAVQKGPLWITFQRSMIIRLNQELMV
SSNKTIDGRGVNVQIRDGGGITMQFVNNVIIHGLHITNIKAKPGGMIRDSFDHYGLRTRS
DGDAISIYGSSNIWIDHLSLSQCEDGLVDVIFGSTGVTISNCHMTKHNDVMLFGASDKFE
GDRIMQITVAFNHFGQGLIQRMPRCRWGFVHVLNNDYTHWIMYAIGGSSGPTILSQGNRF
IAPDNDAAKEITHRDYATPEVWKNWQWSSEMDLFMNGAKFVTSGAPINRAPYKKGFMMKP
RDGTNVSRLTRHAGALNCIVGKPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaataatggtacaaagttctactaagggtttgtttattttcttggttactttt
gccattactattccatgccttgaggctgggattggtgagtttgatgattttcttaaagct
gaagaagaagaagcccataaaattgctcttgatagttatattccagttcctgaagaagtt
gtacatgatctcaatgttgatgttcacttggcaatggaagaagcaaacgacacaaggagg
gaattgaaggaaaatcataatgaaggaccatgtgaatcaagcaacccaattgataattgt
tggaggtgcaaagcagattgggctgaaaatagatatcgattatcaaaatgtggtaagggc
tttggaagaaaggccgttggtgggcttggaggcccaatttatgtggtaactgatgagtca
gatggtgacatggtaaacccaaaacctggtacacttagatatggtgctgttcaaaaagga
ccattgtggataacattccaacgtagtatgatcattagattgaaccaagaattgatggtt
tcttctaacaagacaattgatggtcgtggagttaatgttcaaattagggatggtggtgga
attactatgcaatttgttaataatgttattattcatggtcttcatattacaaatattaaa
gctaaaccaggtggtatgattagggattcttttgatcattatggactaagaacaaggagt
gatggtgatgctatttctatttatggatcttctaatatttggattgatcatctttcactc
tctcaatgtgaagatggtcttgttgatgttatttttggttctaccggcgtcaccatctca
aattgtcacatgacaaaacataatgatgttatgttatttggagctagtgataaattcgaa
ggtgacaggattatgcaaataacagttgcattcaaccattttggacaaggattaatccaa
agaatgccaaggtgtagatggggatttgttcatgttttgaacaatgattacacacattgg
attatgtatgcaattggtggtagttcaggaccaacaattcttagtcaaggaaaccgattc
attgctccggacaacgacgccgcgaaggaaatcacacatagagattatgctacacctgaa
gtttggaagaattggcaatggtcttcagaaatggacttgttcatgaatggtgctaagttt
gttacatcaggtgcacctattaatagggctccctacaagaaagggtttatgatgaaacca
agagatggaacaaatgttagtagactaacaaggcatgctggtgccctaaattgtatagta
ggaaagccttgttag
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