Trifolium pratense (red clover): 123908829
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Entry
123908829 CDS
T08949
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123908829
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123908829
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123908829
NCBI-ProteinID:
XP_045815511
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Position
LG2:52802612..52805053
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AA seq
406 aa
AA seq
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MALFATTLVFYFLLLAPILIYSSHVEDPELVVQEVQKSIIENQNRRKLGYYSCGTNNPID
DCWRCDPNWENNRKRLAECAIGFGRHAIGGKDGKYYIVSDSSDDPINPKQGTLRHAVIQQ
EPLWIIFKHDMVINLKMDLLMNSYKTIDGRGVNVHIAEGPCIRIQQKNNIIIHGIHIHHC
VRGGSGYVSDSPNHRVLKTRSDGDGITIFGGRHIWVDHCSLSNCFDGLIDVVHGSTAITI
SNNYMTHHNKVMLLGHSDSFDEDKIMQATIAFNHFGEGLGGRMPRCRFGYFHVVNNDYTH
WQQYAIGGSSSPTIFSQGNRFLAPDDDDHKEITKHFDSSKGEWQNWNWRSEGDLMLNGAF
FTPSGAGATSSRYAKASSMSARPPMLVASMTAGAGVLRCKKGYQCY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttgctaccacactagtgttctattttttgcttcttgctccaattttgatt
tattcctctcatgttgaagatcctgaattagtggtccaagaagtgcaaaagagcataatt
gagaatcaaaacagaagaaaattgggttattattcttgtggcacaaacaacccaattgat
gattgttggagatgtgacccaaattgggaaaataaccgcaaacgtctagctgaatgtgct
attggatttggaagacatgcaattggaggtaaagatggtaaatattacatagtaagtgac
tcaagtgatgaccctataaatccaaaacaaggtacattaagacatgctgttattcaacaa
gagccattatggattattttcaaacatgacatggtgattaatctaaaaatggatcttcta
atgaattcctacaaaacaattgatggtagaggagtaaatgtacacatagctgaaggacca
tgtattaggatacaacaaaagaataatattataattcatggtatacatattcatcattgt
gtaagaggtggtagtggctatgtgagtgattcacctaatcatcgtgtgttgaaaacaaga
tcagatggtgatgggattacaatttttggtgggaggcatatttgggtggatcattgttct
ttgtctaattgttttgatggtttgattgatgttgttcatggatcaacggctattactatt
tctaataattatatgacacatcataataaagttatgcttttgggacatagtgattcattt
gatgaggataaaattatgcaagctactattgcttttaaccattttggagaagggcttggg
ggaagaatgccaagatgtaggttcggatactttcatgtggtgaacaacgattacacacat
tggcaacagtacgcaataggcggaagttcatccccaactattttcagtcaaggcaacaga
tttctagctccagatgatgatgaccacaaagagatcacaaagcactttgactcatcaaag
ggtgaatggcagaactggaattggaggtctgaaggagatctaatgttgaatggtgcattc
ttcacgccgtctggagcaggagcaacttcttcgagatacgccaaagcctcgagtatgtca
gcacgaccacctatgcttgtggcttcaatgacagcaggagctggagttcttagatgcaaa
aagggttatcaatgctactag
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