Trifolium pratense (red clover): 123908928
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Entry
123908928 CDS
T08949
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123908928
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123908928
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123908928
NCBI-ProteinID:
XP_045815624
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Position
LG2:35364377..35365974
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AA seq
380 aa
AA seq
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MAISTSHYLSLSCFLLPIVLSLVNVYAKETPVLNKIDSCWRAKTNWASNRKALADCAIGF
GKDSIGGKNGAIYIVTDPSDDPENPKQGTLRYGAIQKEPLWIIFKRDMVIALKNELIMNS
YKTIDGRGVKVEIGNGPCITIQGVSHVIIHGIKIQDCKPSKPGLVRSTPDHVGQRQGADG
DAINIFGSSNIWIDHCFLARCSDGLIDIIHASTAVTISNNYFTQHDKVMLLGHNDGYTAD
KVMKVTIVFNRFASGLTERIPRVRVGYAHVANNKYDGWKMYAIGGSSNPTILSEGNFFIA
PNDKDAKQITKRLANGNSKSWNWKSSKDAFSNGAYFVSSGDGSSAPNYTPAQSFEAVPAN
MVPAITLNAGPLSCFVGKAC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccatttcaacttcacattatctttcactttcatgtttcttactaccaattgtttta
agcttagttaatgtctatgcaaaagagacaccggtcctcaacaagatagattcttgttgg
cgcgcgaaaacaaattgggcgtcaaaccgaaaagccttagctgattgtgctattggtttt
ggcaaagattcaattggaggtaaaaatggtgcaatatatatagttacagatccttccgat
gaccctgaaaatccgaaacaaggtacacttcgttatggcgcaatccaaaaggagccgctt
tggataattttcaaaagggatatggttattgcattaaagaatgaacttattatgaatagt
tacaagactattgatggtagaggagttaaagttgagattggaaatggaccttgtattaca
atacaaggtgttagtcatgttattatacatggtattaagattcaggattgtaaaccaagt
aagcctggtcttgttagaagtactcctgatcatgttggtcaacgacaaggcgcggatggt
gatgctattaatatatttggttcgtcgaatatttggattgatcattgttttttggctcgt
tgcagtgatggactaattgatattattcatgcctcaactgctgttaccatttctaacaat
tattttactcagcatgacaaagttatgttgctaggacacaatgatggttacacagcagat
aaagttatgaaagtaacaatagtcttcaatcggtttgctagtggactaaccgaaaggatt
ccaagggtaagagttggttatgcacacgtggccaacaacaaatatgatgggtggaaaatg
tatgctataggaggaagttctaacccaactattttaagtgaagggaatttttttatagca
ccaaatgacaaagatgcaaaacagattacaaagaggttagcaaatggaaattcgaagagt
tggaattggaagtcttctaaggatgcattctcaaatggtgcttattttgtatcatctggt
gatggaagtagtgcaccaaattatacacctgcacaatcttttgaagctgttccagctaat
atggtgcctgctataactctcaatgcaggtccattgagttgttttgttgggaaagcatgt
taa
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