Trifolium pratense (red clover): 123908984
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Entry
123908984 CDS
T08949
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog isoform X1
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123908984
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
123908984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
Arm
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
123908984
NCBI-ProteinID:
XP_045815703
LinkDB
All DBs
Position
LG2:complement(35606707..35617150)
Genome browser
AA seq
1571 aa
AA seq
DB search
MEGNDFPCPSPSPFRSSLLKDISNFKTPKRTSFYLNPQQSPSSHYFTASKSKNTTLLRRP
KKSSSAATNKLKAFQLEHSNSSRIAQIKKQQSLKSLAKSLTVWLNFLLQSPASCGCDVSI
AGTQIVDASKVTKGKRDNGPGISVGVDSTWRTPKRQRKMTCSLRFGKENVSATDLQSSSF
SRLRDSLNDVCSFDDFKQRMSVYLSLGTCEEIFQVMNQVTKTIDEGRLNMKAHCPIVTDF
GLKDKAIKILMCYNPSWLRIGLYIIFGGDSLVSNGDGDSDQDVIFLKMVIDKLFFTHEGL
AKAYAYNKMVEGVYRAGYYENLGNVILKRILLLVLILDKAKCQSCLPIEYGIDGLDGGSP
LLFKAESLVKSSSQVIQEFLSSDVMRGEGNLLTHLVILGYKVSHQQGPLVEYDFRVRDLF
TDLQDGLKLCRAIHLLQNNSSILKKIVVPSDNRKKKLVNCGAALQYLRLAGVSLIDEDDT
MILTEDIINGDKELTTSLLWNMFVHLQLPLLVDKTSLVGEISKIRGLGTDLISSANSSSL
ELLLKWIQAVCDNYDCPVDNFHSLVDGKAIWCLLDYYFQKELHNVCSLKEVYEKSGKTSI
MSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILVVFLASQLFV
KKKVDQLNFHKLLGFAGQSTNLRSLRTVQCHSSSESAQKPYASDVCDNEDAARKFKAIQT
WWQDMADRNCSMQPVISILRTSRTIESNITIRRENAARTIQAHVRGLVVRRKFLKMVTAV
ALLQSVFRAWLKVRQESVCMIFTTGQIYDFSCETLKQSEIYESYAMLFYHRHSFLRLKKS
AQLIQKSVRSWLYWRSQQGCSISPDIMIIDMVAAATTVQKFFRGWMARSRYIHQLDQKEK
ALNLAEQKLIFDLETKAAVSIQLAWKNYICCESTRKEHLFATKIQCNFRRWLLRKQFLNQ
IQAVIKIQSYFRMWRCVNAIQNFKTMFKAVIVIQSFFRGWIARKDACARRYIHQLDQKEK
KEHLFATKIQCNFRRWLLRKQFLNQIQAVIKIQSYFRMWTCVKAIQNFKTMFKAVIVIQS
FFRGWIARKDACARRNQIVEIQRYCRGWLVKRNFLFQRDAIIKIQSVSRSLKCQKTLNCQ
KDAALEIQRFIRGHLTRNRILGSASNLRAVDTGSCTSRPVGLRCFQLEAFMSAIVKLQRW
WKGLLLLKRRIRSAILIQSCTRGWIARRKAIVETHCINVMEALKSQEYAALELQRYIRGH
LTRNLLLGSASKLRAVAARCISKPTGCSSFQLELFLFQVVKLQRWWKNLMLHKLMTKSAI
IIQSHIRGWIARRKTIVYKHYIIVIQSHWKGYVARKQSTKKLMDLRSRLQESSKNIDDSK
RLINRLLAALSQLLNMKSLSDILHTCSTLDLATGHSQRCCEELVAAGAIDTLLRLIQTIS
RSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRHNSIQTIVLELLRNKEEGFFIASELLKK
ICSTHKGVDAILKSPALLKRLRSLVEELTRKTTYQKRNVRGPTPSSAVIVRENTDRRLKE
ATEILKLLIHP
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtaacgattttccatgtccatcaccctcaccttttcgctcttcactcctcaaa
gacatttccaatttcaaaacccctaaacgaacttctttctatctcaaccctcaacaatca
ccatcctctcattacttcaccgcttccaaatccaaaaacaccacactccttcgtcgtccc
aagaaatcttcatcagctgctacaaacaaactcaaagcatttcaacttgaacactctaat
tcttctcgaatcgcacaaatcaaaaaacaacaatccctaaaatcactagccaaatccctc
actgtttggctcaattttcttcttcaatctcctgcttcatgtggttgcgatgtttcaatc
gccggaactcagatcgttgatgcttccaaggtcactaaggggaaacgtgataatggtccg
ggaatttcggttggtgttgattctacatggcgaactcccaagagacagaggaagatgact
tgttcgttgcgttttggtaaggaaaatgtatctgctacggatttgcagagttcatcgttt
tcgcgtttgagggattctctgaacgatgtatgcagttttgatgatttcaagcagcgaatg
agtgtttatttgagcctcggaacttgtgaagaaatcttccaagtcatgaatcaagttacc
aagacaattgatgaaggaaggcttaatatgaaggcacattgtccaattgtgaccgatttt
gggttgaaggataaggccataaaaattcttatgtgttacaatccaagttggcttcgaatt
ggattatatataatttttggtggggattctttagtgtcaaatggggatggtgattctgat
caagatgttatttttctaaaaatggtcattgacaaactgttttttacgcatgagggttta
gcgaaagcatatgcatataacaagatggttgaaggagtttatagggctggttactatgag
aatttggggaatgtgattttgaagagaatattgttgcttgtgcttatccttgataaagct
aaatgtcaaagttgtctcccaattgagtatggtattgacggattagatggtggatcccct
ttattgttcaaagcagaatctttggttaaatcaagtagtcaagtgatccaggaatttttg
tcatctgatgtaatgcgcggagaaggcaatcttctaacacatttggttattttaggatac
aaagtatctcaccaacaggggcctcttgttgagtatgatttccgggtcagagatttattt
acagatctccaagacggactaaaactgtgcagagctattcatcttttgcaaaataattct
tctatccttaagaaaattgttgttccttctgacaaccgcaagaaaaaattggtaaactgt
ggtgctgccctacaatatcttagactagccggggtctcactaattgatgaagacgacaca
atgattttaacagaggatattattaatggagataaagaacttacaacttctttgctctgg
aatatgtttgttcacttgcagctacctttgttggttgataaaacaagtttagttggggaa
atttctaaaattcgcggacttggcacggatctcataagcagtgcaaattctagttctctg
gaattgcttttgaaatggattcaggctgtttgtgacaattatgactgcccagttgacaat
tttcattcccttgttgatggcaaagcaatctggtgcttacttgattattacttccagaag
gaacttcacaatgtctgctcgttgaaggaagtttatgaaaaaagtggaaagacatcaatt
atgtcagttaatgagtattctgatgcactgtacaatttcatattatcccagaaattgacc
acgttactggggaattttcctgaggtacttcagattagtgagctacttcaatataatggc
gcttgcagtgatcgaagtgtggtgatattagttgttttcctggcaagccaattatttgtt
aagaaaaaagtggatcagttaaattttcataagctattgggttttgccggccaaagcaca
aatcttaggagtttgaggacggtgcagtgccattccagttctgaatcagcacaaaagcct
tatgcttcagatgtgtgtgacaatgaagatgcggcaagaaaattcaaggccatccagaca
tggtggcaagatatggctgatcgaaactgtagtatgcagccggttatttctattttgcgg
acatctaggaccattgaaagcaacatcaccattagaagagaaaatgctgcaagaacaata
caagcacatgtcagaggattggttgtacggcgcaagtttctgaagatggtaactgctgtt
gcccttttgcagtctgttttcagagcttggctgaaagtgaggcaggagtcggtctgcatg
atattcactaccggtcaaatctatgatttctcatgtgaaacattgaagcaatccgaaata
tatgagagctatgccatgcttttctatcatagacattcttttttgaggttgaaaaagtca
gcacagcttatccagaaatcagtgaggagttggctctattggaggtctcaacaaggatgt
agtataagtcctgacatcatgattatagacatggtagctgctgccaccactgttcagaaa
ttttttcgtggttggatggcgcgatctagatatattcatcagctcgatcaaaaagaaaaa
gctttaaatttagctgaacagaagcttatctttgatcttgaaacaaaggcagctgttagc
atacagcttgcttggaaaaactacatatgctgcgagtctacaaggaaggagcacttgttt
gcaactaaaattcaatgtaatttccgtaggtggttattgagaaaacaatttttaaatcag
attcaagctgtcataaaaattcaatcatattttcgaatgtggagatgtgtgaatgctatt
cagaacttcaaaaccatgtttaaggctgttattgtcattcaatccttttttcgtggatgg
attgctcggaaggatgcttgtgctcgtagatatattcaccagctcgatcaaaaagaaaaa
aaggagcacctgtttgcaactaaaattcaatgcaatttccgtaggtggttattgagaaaa
caatttttaaatcagattcaagctgtcataaaaattcaatcatattttcgaatgtggaca
tgtgtgaaagctattcagaacttcaaaaccatgtttaaggctgttattgtcattcaatct
ttttttcgtggatggattgctcggaaggatgcttgtgctcgtaggaatcagattgttgag
attcaaaggtattgccggggttggcttgtgaaacggaatttcttgttccaaagagatgct
ataataaagatccagagtgtcagtcgaagtttgaaatgccaaaaaacactcaattgtcag
aaagatgctgcattggagatccagcgcttcatcagggggcatttaactcgaaatcggata
ttaggtagtgcttcaaatttacgtgcagttgatactggtagttgcacttcgagaccagtt
ggcttacgatgttttcaacttgaagcattcatgtctgcaatagtgaaattgcaacggtgg
tggaagggtctcctgttgcttaaacgaaggattagatcggccatcttaatccagtcttgt
actcgtgggtggattgccagacgaaaggccatagttgagacacactgtattaatgtcatg
gaagctcttaaaagccaagaatatgccgcattggagctccagcgctatattagggggcat
ttaactcgaaatttgttattaggcagtgcttctaagctacgtgcagttgctgctcgatgc
atttcaaaaccaactggctgttctagttttcagttggaactgttcttgtttcaagtagtg
aaattgcaacgttggtggaagaatctcatgttacataaattgatgacaaagtctgccatc
attatacagtctcacatccgtgggtggatagccaggcgaaagaccattgtttataaacat
tatattattgttatacagtcccactggaaaggttacgttgcacgtaagcagtcaacaaaa
aaactaatggatttgcgctcaagactacaagaatcttccaaaaatattgatgacagcaaa
cgtctcataaacagactcttagcagcactttcgcagctacttaatatgaagagtcttagt
gacatccttcatacttgttcaacactggatttggcgacaggacattctcagagatgttgt
gaagaacttgtggccgctggggccattgataccttgctgagacttattcaaacaatcagc
aggagtatccctgatcaggaggttttgaagcatgttttgtcaactctccgaaatcttgct
cgctatcctcatctgctagaagttctgatacaaagacacaattctatacagacaatcgtc
ctggagttactgaggaataaggaagagggcttcttcattgcttctgagcttttgaagaag
atatgctcaactcacaaaggcgttgatgccatactcaaatcccctgccttactaaagaga
ctgcgcagtcttgttgaggagcttactagaaagaccacttaccagaaaagaaatgttcgg
ggtcctactcctagttcagctgttattgttagagaaaacacagatagaagattgaaggag
gctactgagattctaaagctgctaattcacccttga
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