Trifolium pratense (red clover): 123909289
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Entry
123909289 CDS
T08949
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123909289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123909289
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123909289
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
123909289
NCBI-ProteinID:
XP_045816061
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All DBs
Position
LG2:complement(60259135..60266997)
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AA seq
711 aa
AA seq
DB search
MTFQQDKFVRFQDWSSEVNSPGIHVTQSGRIRTTLKTVSRKFQRGFESSSERIKGFAKPF
KSFSHHSLLTRCFSSTKKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIPVIDDDKKC
LSRDRKMETTATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIAKRYMS
SYFLIDILAVLPLPQVVILFIIPKLRGSESLNTKNLLKFSVFFQYVPRFIRIVPLYKEVT
RTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQKACRKNTTCLKANLY
CDDHHGSGAITTYLNASCPIQSPNTTLFNFGIFLDALQSGVVGSTDFPQKFFYCFWWGLK
NLSSLGQNLATSTFVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDA
EQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRV
PIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFF
NSEYLKAGDFCGEELLTWALDPRSSSNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRR
LHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLREEENRLQDALAKEGGSSP
SLGATIYASRFAANVLRAIRRNGTRKTRVPERLPPMMLQKPAEPDFTAEEQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcagcaagataaatttgttagatttcaggactggagttcagaggttaattct
cctggaattcatgtaacgcagtcagggagaattagaactacactaaaaacagtttccagg
aagtttcaaagggggtttgaatctagttctgagaggataaagggatttgcaaaaccattc
aaatctttttcccatcacagtttacttactagatgttttagttctacaaagaaaatcctc
gatccgcagggtccttttcttcaaaagtggaacaaaatatttgtgttatcgtgtcttatt
gctgtatcaattgatcctctgttcttctatatccctgtgattgacgatgacaagaaatgt
ctttcaagggacagaaaaatggaaactacggcaacagttttaaggtctttctccgacatt
ttttatattatccatataattttccaatttcgtacgggattcattgctccttcatctcga
gtatttggaagaggtgttttggttgaagattcttgggcaatagcaaagagatatatgtct
tcatacttcttaattgacattcttgccgttcttcccctcccgcaggtggtgattctattt
atcattccgaagctgagaggctcagaatcactgaacacgaaaaacttgctgaaatttagt
gtcttcttccaatatgtgccacggtttatacgaatagttccactatacaaagaagttaca
aggacctctggcattctcactgaaacagcatgggctggagctgcattcaatctctttctt
tacatgcttgcaagtcatgttcttggtgccttttggtacttgttttctatagaaagagaa
accacgtgctggcaaaaagcatgtcggaaaaatactacctgtctaaaagcaaatttgtat
tgtgatgatcatcatgggtcaggcgcaattacaacatacctgaatgcttcatgcccaata
cagagtccaaatacaacactctttaattttggaattttccttgatgcacttcaatctgga
gttgtggggtcaacagacttcccgcagaaatttttttattgcttttggtggggtctaaag
aatttgagttctcttggtcagaatctggcaacaagtacctttgtttgggaaatctgcttt
gcaattttcatttccattgctggtttggtattatttgcattcctcattggaaatatgcag
acatatttgcaatcaacaactacgaggttggaagagatgagagtgaaaaggagagacgca
gaacagtggatgtctcatcgactgctccctgatagcttgagagaaagaatcagacgacat
gagcagtacaaatggcaagaaaccagaggagttgatgaagacaatttgatccgcaatctt
cccaaggatttaagaagagacattaagcgtcatctctgcttggctttgctgatgagggtg
ccaatatttgagaaaatggatgagcagcttttggatgcagtatgtgactgtctcaaacca
gtactttacacgaaagaaagctgcatcgtccgcgaaggcgatcctgttgatgagatgctc
ttcataatgcgtggcaaactattgactgtgacaactaacggtggaagaacaggtttcttt
aactctgaatacctcaaggctggtgacttctgtggagaagagcttctcacatgggcatta
gatccccgttcttcatccaaccttcccatctcaaccaggaccgtccaaactctttcagaa
gttgaagcctttgctctaaaagctgaagatttgaagtttgttgcatctcaattccggcgc
cttcacagtaagcagcttcgccacactttcaggttttactcgcaacaatggcgtacatgg
gctgcatgtttcatacaagcagcatggaggcgctattgtaaaaagaagcttgaagagtct
ctaagggaagaggagaataggttgcaagatgcattggccaaggaaggtggtagctcacct
agcctaggcgctacaatatatgcttcaagatttgctgctaatgtgcttcgagctatacgt
agaaatggcacaaggaagactagggtgcccgagagactacctcccatgatgctccagaag
cctgctgaaccagattttactgctgaagagcaatag
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