Trifolium pratense (red clover): 123909299
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Entry
123909299 CDS
T08949
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123909299
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123909299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF4523
Motif
Other DBs
NCBI-GeneID:
123909299
NCBI-ProteinID:
XP_045816074
LinkDB
All DBs
Position
LG2:complement(60353083..60358841)
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AA seq
477 aa
AA seq
DB search
MASVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGNVVNTKCNVGSNRNQAFI
EFGDLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVHNKTAADVAGNVLLVTIEGE
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL
LPENVGPCNLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMVGLDGKKLE
TESNVLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAK
EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPLIPVVNTQPSILGQPVPMM
GPPDQQYNVSQYTPISDPAMIPQSQAGWGAAPPAVAQSMPLQMHNNIYMPPGNVPPQMPP
GNVPPQMPPGNVPPQMPPGNVPPQMPSGNMPPGMQFSNPGMLQPAATMPAYGSDRIQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtctctagtcagcaacagttccggtacacccaaccaccatcgaaggtgctt
cacttgagaaacttgccatgggaatgtacggaggaggaactgattgaacttgggaagcca
tttgggaatgttgtgaacacaaaatgcaatgttggttcgaaccgaaatcaagcttttatt
gaatttggagatttgaatcaagccattgcaatgatatcttactatgcctcatcgtcggag
cctgcacaagtacgagggaaaactgtatatctgcaatattcaaataggcaagaaatagtg
cataacaaaactgctgcagatgttgctggaaatgtattgttagtaacgattgagggtgaa
gatgcacgtcttgtcagcattgatgtcttgcacttggtcttttcagcctttggatttgtc
cataagattaccacttttgagaagacagcgggattccaggcactggttcaattctcagat
gcagagactgccacttctgcaaaggatgctttggatggaagaagcattcccaggtatctg
ctccctgaaaatgtgggaccatgtaacctcaagatcacatattctggacattcagactta
acagtgaagtttcaaagccacaggagcagggactataccaatccttaccttcctgttgct
caatcagccattgagggaggtggacaggtcatggttggtttggacgggaaaaaactggag
actgagagtaacgttcttcttgcatctattgagaacatgcagtatgctgtaacattggat
gtcttacatatggttttctctgcttttgggcctatccaaaagattgcaatgtttgataag
aatggtggtttacaagctttgattcaatatccagatactcagacagctgttgtggccaag
gaagccttggaaggacactgcatatatgatggaggattttgcaagcttcacctctcgtat
tcacgtcatacagatcttagtataaaggtcaacaatgataggagtagagactataccatt
cctcttatacctgttgtgaacactcagccctcaattttagggcaacctgttcccatgatg
ggtcctcctgatcagcaatacaatgtgtctcagtatactccaatttctgacccagctatg
atacctcaatctcaggcaggatggggagcagctccaccagcagttgctcaatctatgcca
ctgcagatgcacaataatatttacatgccacctggaaatgtgccaccacaaatgccacct
ggaaatgtgccaccacaaatgccacctggaaatgtgccaccacaaatgccacctggaaat
gtaccaccacaaatgccatctggaaacatgccaccaggaatgcaattttcaaatcctggt
atgctacaaccggcagccacaatgcctgcatatggatctgatcgcattcaataa
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