Trifolium pratense (red clover): 123909303
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Entry
123909303 CDS
T08949
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123909303
Transcription machinery [BR:
tpra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123909303
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
HTH_11
Motif
Other DBs
NCBI-GeneID:
123909303
NCBI-ProteinID:
XP_045816079
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Position
LG2:complement(60399750..60404163)
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AA seq
547 aa
AA seq
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MILCVKLAIDNLKDIGIENLSFEFLSKRCLGELGMGVVTVSSSAARSPLGLNTKFSTHHT
VLKRPIIVAFKGDKQNDTALVTTQEKIPTQVKTKTHKKRIAKTNKLPKKEKAVFTEENFP
SSLDVDYNEAAAILENIYKLSPPSDAFDVDYIKSKIKRVSRRGKKIDDVSKEELNDDRVV
RSQKTKAKRMNLDERIALKTTDNSEDVIPTRKKRNGRNRIEKIDELLREYSAPASLVSLD
WKKMKIPPVLPNSEHAFLFKLMQPMKALLQVKDDLEKELSREPTEEEIADATNMRTTKVK
KAIEVGRAARNKLIKHNLRLVLFVINRYFSDFANSPRFQDLCQAGVKGLITAIDRFEPNR
KFRLSTYGLFWIRHAIVRSMTLSSFSRVPFGLESVRAEIQRAKSELTFKHQRPPTEEEII
ERVHISPERYRDVTKASQPILSLHSRHITTEEEFINGVVDDGGLDGDNRRQPALLRLALD
DVLDSLKPKENLVIRQRFGLDGKGDRTLGEIASNLNISREMVRKHEVKALMKLKLSARLD
YLRRYVV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtgtgtgaaacttgcaatcgataatttgaaagatattggcattgagaatctg
tcatttgaatttctttctaaacgctgcttaggcgaacttggtatgggagttgtgaccgtt
tctagctcagctgctcggtctccactaggattgaatacaaagttttcaactcaccatact
gtattgaagagaccgataattgtagcatttaaaggagataaacagaatgacacagctttg
gttacaactcaagagaaaattccgacgcaagttaaaacaaagacgcacaaaaaaaggata
gcgaaaaccaataaactacctaagaaagaaaaagctgtcttcactgaggaaaattttcct
tcttcattggatgtggactacaacgaagctgctgccatacttgaaaatatatacaaactt
agtccgccatccgatgcatttgatgtagattatataaaaagtaagatcaaaagagtctct
cgaaggggtaagaagatcgatgatgtaagtaaagaggagttaaacgatgatagggtggtt
agaagccagaaaacaaaagccaaacggatgaatcttgatgagaggattgcgttaaaaaca
accgacaatagtgaagatgtcattccaactaggaaaaaaagaaatggaaggaatagaatt
gagaagattgacgaacttcttagggaatattcagcaccagctagtttggtcagtctggac
tggaaaaaaatgaaaatacctccagttcttcctaattccgagcatgcatttttgttcaag
ttgatgcaaccgatgaaggcacttcttcaagtgaaagacgatttagagaaggagctatca
agagaacctacagaggaggaaatagctgatgcaacaaacatgcgcactactaaagtaaag
aaagcaatagaggttggtcgagctgcaagaaacaagctgataaagcacaacctccggctt
gtcttgttcgtgatcaacagatacttttccgattttgctaatagcccgaggttccaagat
ctttgtcaggcaggagttaagggacttataacagcaattgatcgttttgagccaaaccgg
aaatttcggctttcaacctacggtttgttttggataagacatgctatcgttcgttccatg
accctttcaagcttctcgcgggttccctttggacttgagtcggttagagcagagatccaa
agagctaaaagtgagttaacatttaagcatcaaaggccaccaacggaggaagaaataata
gaaagagttcacatatcccctgaaagataccgtgatgtaacgaaggcatcacaacctatt
ctttcactgcattcgagacatataaccacggaagaagagtttatcaatggtgtcgttgat
gatggcggtcttgatggtgataataggaggcaacctgctttactaaggcttgctcttgat
gacgtgcttgattcgctgaagcctaaggagaacttggtgatcagacagagatttggactt
gatggtaagggtgacagaacattgggagagattgcgtcaaacttgaacatctctagagaa
atggtgagaaagcacgaagtcaaggctctcatgaagctcaaactttcagctcgattggat
tatcttcgtcgttatgttgtataa
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