Trifolium pratense (red clover): 123909305
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Entry
123909305 CDS
T08949
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
123909305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123909305
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123909305
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
RPT
Motif
Other DBs
NCBI-GeneID:
123909305
NCBI-ProteinID:
XP_045816082
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All DBs
Position
LG2:complement(60415779..60418612)
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AA seq
342 aa
AA seq
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MDENLYNIFEDRTEFGNSNSFGVTDDDLFAILESLEDFTDFPLIKESEAVTPKENEDSST
SRLVSQKSTTSLQDSETELETEHKSKRQKLTPTLLEEQINNVGQQRVSHITVERNRRKQM
NEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQLLQALEAKKQRKVYNEVLSPRPS
QLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPSSPYKPRLQQSYIALSPLDPSPT
TSSASSVNDNINELVANSKSPIADVEVKFSGPHVLLKTVSQRIPGQALKIISALEDLALE
ILHVNINSTPDDTMMNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacttatataacatttttgaagacagaacagaatttggaaacagcaacagt
tttggtgtaacagatgatgatctttttgccattttagaaagtctagaagatttcactgat
tttcctctcatcaaagaatctgaagctgttactccaaaagaaaatgaggacagttcgaca
tcgagattggtgtctcaaaaatcaaccacttcactacaagattctgaaactgaacttgaa
acagaacacaaaagcaagagacagaagcttacaccaactttgttagaggaacagattaac
aatgttggacaacaaagggtttctcacattactgtggagagaaacagaagaaagcaaatg
aatgagcatttgtctgttttaaggtctcttatgccttgcttttatgtcaaaaggggagat
caagcatcaataattggaggtgtagttgattacatcaatgagttacaacaactactccaa
gctcttgaagccaagaaacaaagaaaagtatataatgaagtactaagtccaagaccttca
caactaagtccaaggttagtttcaagtccaagaccttcaccactaagcccaagaaaacca
cctctaagtccaagactaaacttaccaattagtccaagaactccacaaccaagtagccct
tacaagccaagattacaacaaagctacattgcactttcacctcttgatccatctcctact
acttcctctgcttcctctgtcaatgataatatcaatgagcttgttgcaaattctaagtca
cctattgctgatgtggaggtcaagttttcaggtcctcatgttcttttgaaaactgtttct
caaagaattccaggtcaagctttgaagattatatctgcacttgaagatcttgcacttgaa
attcttcatgttaacattaatagtactcctgatgataccatgatgaactccttcactatc
aagattggaattgaatgccaactgagtgcggaagaactagctcaacaaattcagcaaaca
ttctgctaa
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