Trifolium pratense (red clover): 123909461
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Entry
123909461 CDS
T08949
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123909461
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123909461
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123909461
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123909461
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123909461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
UBA
Utp25_C
UBA_3
UBA_9
Motif
Other DBs
NCBI-GeneID:
123909461
NCBI-ProteinID:
XP_045816261
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All DBs
Position
LG1:13125637..13132332
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AA seq
870 aa
AA seq
DB search
MDSNNKSSDQVISEMVEMGFEHSKILEAIKVVGLSIPSIVDHIFNTSTSSSSSSNRESST
THISKSLPSNGKALKKRTFSSSLQVPKSKTINHYFQSSSKVNEKNKNVVVDVNDGGDDDV
EEHKESLPQMGFDLDPDVASDWEMRASILLQKHFGFSSLKSFQKEALSAWISRRDCLVLA
ATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKK
AMSGMYSIVYICPETVLRLIQPLQKLAESHGIALFAIDEVHCVSKWGHDFRPAYSRLSAL
RENFTTGKLKSLKFDIPVMALTATATKRVREDILKSLRMSKDTSVVLTSFFRPNLRFMVK
HSRTSWASYESDFHELIKVYGGNKKAFTSDEADDVSNCSDASDTDSVSSDNVDDNQDDYD
ERDISSMHARNTGNHKKRRKLTIEFLENDVDVFQSADDLDVTCGEFCVQPPPKQCELSET
VDPPAKPEKRLKMLKEPLERGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLR
RTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC
ILYANLARKPSLLPSRRSEEMTKLAYIMLSDCFRYGMNTSCCRAKTLVEYFGEDFSHQKC
LLCDVCTNGPPQRQNLKEEACILLQTIGAHNAHIYSMDSSYNDDIHFNSKDRRLGERPSL
MTLVRSIREQFQKFLTTDILWWRGLSRILEAKGYIREGDDKTNVQIKYPELTELGLEFVK
SMNEETFYVYPEADMLLETKIDKPFSSFSEWGKGWADPEIRRQRLERMQQDRSPTKRKSP
RKQKKRRGKKVKPDLRTSRGRLTAKLTKHK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggattccaacaacaaatcctccgatcaagtaatttcagaaatggttgaaatgggtttt
gagcattccaaaattcttgaagcaattaaagtagtgggtctatcgattccaagcattgtg
gaccatattttcaatactagtactagtagtagcagtagcagtaatcgtgaatcatccact
acccacatctcaaaatcacttccaagtaatgggaaagctctcaaaaaacgaactttttca
tcttctcttcaagttccaaaatcgaaaacaatcaaccattatttccaatctagtagtaaa
gttaatgagaaaaacaaaaatgttgttgttgatgttaatgatggtggtgatgatgacgtg
gaagagcataaggagtctttacctcaaatgggatttgatcttgatcccgatgttgcatct
gattgggagatgagagctagcattctgttgcaaaagcattttggtttttcttcgttgaaa
agttttcagaaggaagctttgtctgcttggatttctcgtagagattgtcttgtcctggct
gctactggatctgggaaatccctgtgctttcagattcctgcattgttaactgggaaagtg
gtggttgtgatttcgcctttaataagtctaatgcatgatcaatgcttaaagctaacaaaa
catggaatcagtgcttgttttcttggctctgggcagcctgataatactgttgaaaagaaa
gcaatgagtggcatgtatagtatagtgtatatttgcccagagacagttctaagattgatt
caacctctgcaaaagcttgcagaaagccatggtattgctttgttcgcaattgatgaggta
cattgtgtttctaaatggggccatgattttcgtccagcttacagccgactgtctgcattg
agggaaaatttcactactggcaagctaaaatccttaaaatttgatatacctgtaatggca
ttgacagctacagctacaaagagagttcgggaagacattttaaaatcgctgcgtatgtca
aaagatacaagtgttgttctcacatcattttttcgacctaatttacggttcatggtaaag
catagtagaacatcatgggcttcttatgagagcgattttcatgaattgattaaagtatat
ggtggaaataaaaaagctttcacctcagatgaggcagatgatgtttccaattgctctgat
gcttctgatacagacagtgtttcttctgataatgtggatgacaaccaagatgactatgat
gaaagagatattagttccatgcacgcaagaaacaccggcaatcataaaaaaagaagaaaa
ttgacaattgagttcctggaaaatgatgttgatgtctttcaaagtgcggatgacttggat
gttacctgcggtgaattttgtgtacaacctcctccgaagcaatgtgagttatctgagaca
gttgatccacctgcaaaaccagaaaaaagactcaaaatgcttaaggagcctttggaacga
ggaccaacaattatatatgtacccaccagaaaagatacagtgagaattgcaaagtatcta
tgcaagtctggtgtgaaagctgctgcttacaatgccgggctgcccaagttgcacctaaga
aggactcataaagagtttcatgaaaataccttagaggttgttgttgcaaccatagcattt
ggaatgggaattgacaaatcgaatgttagaagaatcatccactatggttggccgcagagt
ttggaagcctattatcaagaagctggacgggctggtcgagatgggaagttagcagattgc
attctatatgcaaacctagcaaggaagccgtcacttttgccgagtcgtagaagtgaagaa
atgactaaactagcatatatcatgttgtctgattgtttcagatatggaatgaatacttca
tgttgtcgagcaaaaacacttgtagaatacttcggagaggatttcagccatcagaaatgc
ctcttatgtgatgtgtgcactaatggaccacctcaaagacagaatcttaaagaggaggcc
tgtattttactgcaaactataggggcccataatgcacatatatattccatggattcctca
tataatgatgatatccatttcaattctaaggatagaagactaggagagaggccaagtctt
atgacgttagttagaagtataagggaacagtttcaaaagtttttaaccactgatatattg
tggtggagaggccttagtcgaattttggaagctaaaggatatatcagggaaggagatgat
aagacaaatgttcagataaaataccctgagctaacagaactaggtttggaatttgtgaag
tccatgaatgaagaaactttctatgtttaccctgaggcagatatgttgcttgaaacaaaa
attgacaaaccattttcctcattctcagaatggggaaaaggttgggctgatcctgagatc
cgtcgccagcgcctagaaagaatgcaacaagatagaagtccaacgaagcgaaagagtccc
agaaagcaaaaaaagaggagaggtaaaaaagtgaaacctgatttgaggacttcccgaggt
agactaacagcaaaactcacaaaacataagtga
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