Trifolium pratense (red clover): 123909478
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Entry
123909478 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123909478
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123909478
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123909478
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123909478
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123909478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Fin
Motif
Other DBs
NCBI-GeneID:
123909478
NCBI-ProteinID:
XP_045816275
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Position
LG2:35903288..35909963
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AA seq
920 aa
AA seq
DB search
MAETETQTETQKQHDLIQRKIVFVPNNKPFKGFSNDFHIETLNPTTTTTEKRQLVCVNGT
TSHPPPKKHDGSEFSEFGLDPELNVGITFRRIGAGLWNLGNTCFLNSVLQCLTYTAPLAA
YLQSGKHKSSCRVTGFCALCAIQNHVSRALQSTGNISPSDLVGNLRCISRNFRKSRQEDA
HEYMVNLLESMHKCCLPSGVPSESPGAFEKSLVHKIFGGRLRSQVKCRQCSFSSNKFDPF
LDLSLEILKANSLQKALANFTASELLDGGEKQYHCQHCKQKVQAIKQLTIHKAPYVLAIH
LKRFYAYDPHKKIKKNVEFDSALDLKPFVSGSYDGDCKYSLYGVLVHSGFSTHSGHYYCF
VRTSNNMWYTLDDSRVSHVSESKVLEQQAYMLFYVRDRKSVAPSKPVDIPKEVNVKTNVI
GSRYPTSNNALKDYPNGHVENKLCVEPSLTAETQKNTLNADPSRVSCANNALVQQKNSFI
LAKGLMHGETPVSELTSKELAQKNSTVDVSFAKSELECLSSLDHPGKDKVPCNQKCLDAT
ADDRPNLFNKNAFLKEGVGSPLKEPAISNPQTLIGQNVSDRTSQSQKMNSPTEVDAVAAQ
DSVTNFSEKACLVTSVGTSNASVEEEACNLLVENAVVSQKLLKGSSNRSSSDSSVNQKQV
KKPKKKFPKYHGSIMRLRPILRYVAYLGPRKKDHKKSKRREKLNKPASSSDAGLSTSGKA
QLLPSVTSYSESKATKPCPMPVANMKRNDVSLMEHNAEGELKKRKRMDQNCAVLATATQI
ENMSQCLLENKFEAAHAFSPQEDKTDQMHNSVMRMLTRGLEETVVARWDDVELPSSEPLE
SKNDQIAHIGYVGDEWDEQYDMGKRKKLRLKQSFGGPNLFQQIANEKSKFKSSKLNANEK
SKFKSAKLNHSSSGNPPFRI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccgaaactcaaaccgaaactcagaaacaacacgatctaattcagagaaaa
atcgtctttgtccctaacaacaaaccttttaaaggcttttccaatgatttccatatcgaa
accctaaaccctaccaccaccaccaccgaaaaacggcaacttgtttgcgttaatggtact
acctctcatccacctcccaaaaaacacgatggttccgaattctccgagtttggtttggat
ccagagctcaacgttggaattacctttcgcagaattggagctggattatggaatcttgga
aacacttgttttctgaattcagtgttacagtgtttgacatatactgcgcctttagctgcg
tatctgcaaagtggcaaacataaaagttcatgccgagttactgggttttgtgctctttgt
gcaatacagaatcatgttagtcgtgcattgcaatcaactggaaatatatctccgagtgat
ctggttggaaatctgcggtgcatatcacgcaatttccgaaaatctaggcaggaggatgca
catgaatatatggtgaacttacttgagtcaatgcataaatgttgcctgccctctggagta
ccgagtgaatcacctggtgcttttgagaaaagtttggttcacaagatcttcggtggtcgt
cttcgaagtcaggtgaaatgcagacagtgttctttttcatccaacaagtttgatcctttc
ttagacttaagtcttgaaatattgaaggcaaattcactgcaaaaggcacttgcaaatttc
acagcttcagaattgttggatgggggagagaagcaataccattgtcaacattgcaaacaa
aaagtgcaggctatcaaacaactgacaattcataaggcaccttatgtgctggcaattcat
ctaaagagattctatgcttatgatcctcataaaaagattaaaaagaatgttgagtttgac
tctgcactggatttgaaaccttttgtcagtggctcatatgatggagattgcaagtactca
ttatacggggtccttgttcattctggtttcagcactcattctggccactattactgcttt
gttcgcacttcaaataacatgtggtataccttggatgacagtcgggtaagtcatgtcagt
gaatcgaaagttctagaacagcaagcttacatgttattttatgttcgtgatagaaaaagt
gtagctccaagcaaacctgttgatatccctaaggaggtaaatgtgaaaaccaatgttatt
ggaagtagatatccaacttcaaacaatgcacttaaagattatccaaatggtcacgtggaa
aataagttatgtgttgaaccttctttgaccgctgaaactcagaaaaatacgttaaatgcg
gatccatcaagggtttcatgtgcgaataatgctctggttcagcaaaagaatagtttcatt
ttagcaaaaggcttaatgcatggtgaaacccctgtatctgaactcacttctaaggaactt
gctcagaagaactcaacagtcgatgtctcttttgctaaatcagaacttgaatgcttgtca
tccttagatcaccctggaaaagataaggtcccttgtaatcagaaatgtttagatgcaaca
gctgatgacagacctaatctgttcaacaagaatgcatttttaaaagagggtgtaggttct
cctttaaaagagccggctataagtaatccccaaactcttattggtcaaaatgttagtgac
agaacatcacagtctcagaagatgaattcccccactgaagttgatgctgttgcagctcaa
gattcagtcacaaatttctcagagaaagcttgtcttgtaacttcggttggaacttcaaat
gcttcggttgaggaggaagcatgcaatttattggttgagaatgcggttgtttctcagaaa
cttcttaaaggttcatcaaatagatcctcgagtgactcaagtgttaatcaaaagcaagtg
aaaaaaccaaagaagaagtttccaaagtaccacggatcaatcatgcgacttcgcccgatc
ctccgttatgtggcatacctagggccgcggaagaaggatcacaaaaaaagtaaacgccgc
gaaaaattgaataaacctgctagctcatcagatgctggactatctacttctggaaaagca
cagttacttccctctgtaacaagttattctgaaagtaaagcaactaagccatgtcctatg
cctgttgctaacatgaaacgtaatgatgtatctctgatggaacataatgctgaaggagag
ttgaagaagaggaagaggatggaccagaactgtgctgtgcttgcaacagctacacaaata
gaaaatatgtcccagtgtttattggaaaataaatttgaagctgcacatgcttttagtcca
caggaggataagacagatcaaatgcataatagtgttatgaggatgctcactagaggtcta
gaggagacagttgttgcacgttgggatgatgtggaattaccttcatctgagcccttggaa
tcaaagaatgaccagatcgcacacattggatatgttggggatgaatgggatgagcaatat
gacatggggaagaggaagaagttaaggttgaagcagagctttggtggaccaaatcttttc
caacaaattgctaacgagaaatcgaagtttaaaagttcaaaattgaacgctaacgagaaa
tcgaagtttaaaagtgcaaaattgaaccattcgagctcagggaaccctccatttaggata
tga
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