Trifolium pratense (red clover): 123909523
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Entry
123909523 CDS
T08949
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123909523
03015 mRNA surveillance pathway
123909523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123909523
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123909523
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
123909523
NCBI-ProteinID:
XP_045816319
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All DBs
Position
LG2:52949296..52957224
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AA seq
624 aa
AA seq
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MGALKLELHHTSQRVGDNDIDADLDPEPDWSFDALVSELNALENKLGVNSSTQPLHFHKT
TSRLNLSGGKEIEKGRSFVFCAPEYETESEDDDDDDKALVSASTGKRFNYDELYLSDSDD
DSDVDPAFEVQPYLMNKVGEVEGALIELTQEHQLRVKDEIRSKISVLETSLLNESQNSIS
SLLRVEKFKETRQELDKKFDTQYQRQIAEALDSHLTAVQRDRELRSQIEERKIRNDAAHE
EAKKKVAMQEEKQQKEKAKAEAEAKLKAEEVKQAALEAERKATTEAKSKAAMEAEKRAAA
EAERRAEKDAKESTKSSPLNTETKESGYVYRAAANALNIEQGRLQKLKELCEGNQIMRSS
SKQDYTRYESHISRNIKTIRGISHNVRSKASELINLLNDRQCPQSISAEIFVKKVVSSCS
SPGSAPFAIAYVIVLITSKVPYVMDLLLAELHRACLYTVPKHMVYKTSIFQSKEAYFRSI
GYREDGEKLEGTEDYLKRLESYMKLYGALVQTEIPNIQNLHGLQEGWAWLARFLNYMPAN
LYTAVSLDTFLQMAGFALFQRYKSQFLKMLNAISDNFLVGLKSQNVPESTRIVANIKAYI
EDKKFCQVPEGRKLQSDTMSRVLM
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggagctctaaaattggaacttcatcatacttcacaaagagtaggtgacaatgacatt
gatgctgaccttgatcctgaacctgattggagtttcgatgctcttgtctccgagctcaat
gctttggagaacaaactcggcgttaattcttccactcaaccattgcattttcataaaaca
acatcaaggcttaacttatctggtgggaaagaaattgagaaaggtagaagttttgtattt
tgtgcccctgagtatgagacggagagcgaggatgacgatgacgatgacaaagcgttagtg
tcagccagcaccggcaaacgcttcaattatgatgaactttatctgagcgacagtgatgat
gattccgatgttgaccctgcttttgaagtgcaaccttacctaatgaataaagttggggag
gtagaaggtgccttaattgaattgacacaggaacaccagctgagggttaaggatgaaatt
aggagtaagatctcagtattagagacatctctactgaatgaaagtcagaactccatttct
tcccttcttcgagttgagaaattcaaagaaacaaggcaggagttggataaaaagtttgac
actcaatatcagcgccaaattgcagaagcacttgatagtcacttgacagctgttcaacgg
gaccgtgaactcagatcacaaatagaagaaaggaaaataagaaatgatgcagcgcatgaa
gaagccaagaaaaaggttgctatgcaagaggaaaagcaacagaaagaaaaggctaaagct
gaagcagaggccaaacttaaagctgaggaagtaaaacaagctgcattggaagctgaaaga
aaagcaacaacggaagccaaatcaaaggcagcaatggaagctgaaaaaagagcagcagca
gaagctgaaagaagagcagaaaaggacgccaaagaaagtaccaaatcaagcccattaaat
actgaaaccaaggaatccggttatgtatatcgagctgcggcaaatgctttaaatatagag
cagggtaggctacagaaactgaaagagctgtgtgagggaaaccaaattatgagatcaagt
tcaaaacaggattatacccgctatgagagtcatatttcccggaatataaagacaataagg
ggaataagtcacaatgtaagatcaaaagcaagtgaacttattaatcttttgaatgatcgt
caatgccctcaatcaatcagtgctgagatatttgttaaaaaggttgtttcatcctgttca
agccctggtagtgctccctttgcaattgcctatgtcattgttctcattacatctaaggtc
ccatatgtaatggatcttttgctggctgagcttcatagggcctgcctttataccgtccca
aagcacatggtctacaaaacgtctatctttcaatcaaaagaggcatacttcagaagtatc
ggttatcgagaagacggtgaaaagttggagggtacagaagattatttaaagcggctagaa
tcgtatatgaagttgtacggtgcactggttcagactgaaattcccaacattcaaaatttg
catggtttgcaagaaggttgggcgtggcttgcaaggttcttgaattatatgccagccaat
ctttatacagctgtttcactcgatacattcttgcaaatggctggatttgctctatttcaa
agatataaatctcagttcttaaagatgttgaacgctatctcagacaactttttagttggt
ctgaaatcacaaaatgtaccagaatcgacaaggattgttgcgaatataaaggcttatata
gaagataaaaagttctgtcaagtgccagaaggaaggaagctgcagtcagatacgatgtca
agagtactaatgtaa
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