Trifolium pratense (red clover): 123909539
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Entry
123909539 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123909539
04121 Ubiquitin system [BR:
tpra04121
]
123909539
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123909539
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123909539
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123909539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
HypA
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
123909539
NCBI-ProteinID:
XP_045816341
LinkDB
All DBs
Position
LG2:50403748..50406232
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AA seq
357 aa
AA seq
DB search
MDETMAARYWCHACSQIVSPIMGMEMKCPVCQGGFVEEMSSATGISDLPNIPEPDFGPDR
SPSLWAPILLGMMGNPRLRRRMRRIELEEDYDSGNRDDENSGVGHYDRELESILRRRRRS
SATIQQLLQGIRAGLTSEPQENTTDSDDHVREREREHVILINPFNQTIIVQGSYDSNRDQ
NDNPNPIGSLGDYFVGPGLDLLLQHLSENDPNRYGTPPAPKEAVEALPTVKINENLQCSV
CLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRSQLRVDEPKQDSDVSRNRRNQ
RDDANIGHANADAEGDSEGRSPNGGRRFSFPWPFNGLFSSSASSSSSNGNGTQSERN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacaatggcagcaagatattggtgtcatgcttgttctcaaatagttagtccc
ataatgggaatggagatgaaatgcccagtttgtcaaggtggatttgttgaagaaatgagc
agtgccactggtattagtgacttgccaaatataccagaacctgattttggaccggatcgt
tctccttccctttgggcacctatcttgctaggcatgatgggtaatccgcggcttcgtaga
agaatgagacgtatagagcttgaagaagactatgatagtggtaatcgtgatgatgaaaat
agtggtgttggacattatgatcgagagcttgagtccatccttcgaaggaggagaagaagc
tcagctaccattcaacaattgctccaaggcataagagctggattgacatctgaaccacaa
gagaatactactgacagtgatgaccatgttagggaaagagaaagagagcatgtaatcttg
attaacccttttaatcagactattatagttcaaggttcctatgattcaaaccgggatcaa
aatgataatccgaaccccattgggtctctaggtgactattttgtagggcctggtttggat
ctattgttgcaacatttgtcagagaatgaccctaatagatatggaactccacctgcaccg
aaggaagccgttgaagctctacctactgtgaagatcaatgagaatttgcaatgttctgtc
tgtttggatgattttgaagttggttctgaagctaaagagatgccatgtaaacataggttt
catagtgcttgtatcctgccctggctggagcttcatagttcttgtccagtttgcaggtct
caattgcgagtggatgaacctaagcaagattctgatgtgtcaaggaatcgcagaaatcaa
agggacgatgcaaatatcggacatgccaatgccgatgctgaaggagatagtgaagggaga
agtccaaatgggggtagaagattctcgtttccgtggcctttcaatggattattttcttca
tcagcttctagttccagttcaaatggaaatggtactcaatcagaaagaaactga
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