Trifolium pratense (red clover): 123909629
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Entry
123909629 CDS
T08949
Name
(RefSeq) DNA topoisomerase 2-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123909629
03036 Chromosome and associated proteins [BR:
tpra03036
]
123909629
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
123909629
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Topoisomerases
123909629
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
123909629
Centrosome formation proteins
Centriole proteins
123909629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
123909629
NCBI-ProteinID:
XP_045816457
LinkDB
All DBs
Position
LG2:complement(52356542..52364734)
Genome browser
AA seq
1439 aa
AA seq
DB search
MEKRPLQTSNAANIPSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYENDEMVN
RSISYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPERNTISVYNNGDGVPVEIHQE
EKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRLKKYKQ
VFSNNMGTKSEPVITKCKANENWTKVTFKPDLEKFKMTYLEEDVVALMKKRVLDMAGCFG
KTVKVELNGTLIRFKSFRDYADLFLKCAEKSKPTPLPRIHAKVGDRWEICVSLSDGQFQQ
VSFVNSIATIKGGTHVDYITNQITAHVMNKVNKKKKDANVKAHTVKNHLWVFVNALIDNP
AFDSQTKETLTTRQASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKNLKKTDGTKT
QRIRGIVKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLN
VREASSKQIMENEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQDHDGSHIKGLLIN
FIHSFWPSLLKVPSFMVEFTTPIIRASHSNGTKLSFYSMPEYERWRERLGNSANGWKLKY
YKGLGTSTPQEGREYFRDLDKHKKDFIWEDELDGNAIELAFSKKKAEDRKTWIRNFEPGT
CRDHEAKLINYKNFVNKELILFSRADLQRSIPSMVDGLKPGQRKILFCSFKKKLVKEIKV
GQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLKPNGQFGTRNLGGKDHASSR
YIYTELNTVTRCLFHEDDDKLLEYLNEEGRSIEPNWYIPIIPLVLVNGSEGIGTGWSSYI
PNYNPKEIIANVRRLLNEEEMVPMDPWYRGFRGTIEKSAKEGGYIVSGSVVEIDEQTFRI
TELPVRKWTQDYKQFLESITDGTPNVKDPLIEDFRQNGDDAIVDIEVKMKPEKIASIMQE
GLFKKFKLTNTISTSNMHLFDAEGKIKKFDTPEQILEEFYPLRMEYYERRKKYILANLER
LLLILDNKVRFILGVVNGEIIVSNRKKAELLIELKQKGFTPIRKGKSAEPQVAGANDDNS
EGQEDEQETVSRPVSVEGATWGDYEYLLSLSIGTLTLESVQKLLDEKAEKEKEYEILMGT
PTKSLWLKDLDDFEKKLDELDSKEAEDDRKRSSQESKKTANGFAAKPAKKPPQPRKNTKK
NKDVEPENDNYSMEIENAVEVVKPKGQAGSKNTQKKAGDESDIPSLQERLAAYNFESSGE
KSGAMESDEPVPAGKKQINKRGGAKKMSSTIVLGSDSDNENDDNFEVQQKAAPAKKGGRK
PAAQNAKAPALPKKRNVGTKQTLGKKLLTGMLQPAESTATSPKKKVRKTGESSIEDLSAG
SASNSPISEDEVVEIAPQPARERPQRANRTQKIYVVSESESDNDSDEDAELSDMEEDDD
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgacctctccaaaccagcaacgccgccaacattccttcgaaaacaattgaa
gaaatgtaccaaaagaaaacacagctcgaacacattctcctccgtcctgatacctacgtt
ggttcaattgaaaaacacactcaaaatctctgggtttacgaaaatgacgaaatggttaac
cgttcaatttcgtacgttcctggactttacaaaatcttcgacgagattctcgttaatgcc
gctgataacaaacagcgagacccgtcaatggattcactgaaggttacgatcgatcctgaa
cggaatacgatttctgtttacaataacggtgacggtgttccggttgagattcatcaggaa
gagaaggtttatgttcctgaactgattttcggtcatcttcttactagtagtaactatgat
gataatgtgaagaaaactactggtggtcgtaacggttatggtgctaagcttacgaatatt
ttttcgaccgagtttgttatcgagacggctgatggacgtcgtctaaagaagtataagcag
gttttctcaaacaatatggggacgaagtctgagccagtgataaccaaatgcaaagctaat
gagaattggacaaaggtgacatttaagcctgacttggagaagttcaaaatgacatatctt
gaagaggacgttgttgccttgatgaaaaagcgtgtgctggacatggcagggtgctttgga
aagactgttaaggttgaacttaatggcaccttgattcgttttaagtcgttccgtgattat
gctgatctctttctgaaatgtgccgagaagtccaaaccaactcccctgccaaggattcat
gcaaaagtaggtgataggtgggagatttgcgtgagtctaagtgatgggcagtttcaacag
gtcagctttgttaactccattgctacaatcaaaggtgggactcatgttgattacatcacc
aatcagattactgcccatgtaatgaataaagtaaataagaaaaagaaggatgccaatgtg
aaagctcacactgtgaagaatcatttgtgggttttcgtcaatgctcttattgacaaccct
gcttttgattctcaaactaaggagactctcacgactagacaagctagttttggttcgaaa
tgtgatgttccagaatcaatgctgaaggatgttgaaaaatctggaatagtggacaccctc
ctatcatgggcagattttaagcaaagtaaaaatttgaagaaaactgatggaaccaagacc
cagaggatccgtgggattgtaaagcttgaggatgccaatgatgctggtggaaggaactca
gagaagtgtacattgatattgacagaaggagattctgccaaggcccttgctatggctggg
ctctctgttgtgggtcgagaccactatggtgtgtttccattgagaggcaaattgctcaat
gtgcgagaagctagcagtaaacagataatggaaaatgaagaaattcaaaatataaagaag
attcttggactgcagcaaaacaaagagtacacaaacgtgaagtctttgagatatggtcat
ttgatgattatggctgatcaggatcatgatggctcccacatcaaagggctactgataaac
ttcattcattcattctggccatcactacttaaagttccatctttcatggttgagtttacc
actcccataataagggcttctcattcaaatgggacaaaattatcattttattccatgccg
gaatatgaaaggtggagagaaagattgggaaatagtgcaaacggttggaagctaaagtac
tataaggggttgggtacaagtactccccaagaagggagagagtactttcgagatcttgat
aagcacaaaaaagacttcatatgggaagatgaacttgatggaaatgccattgagctggca
ttcagtaagaaaaaagctgaagataggaagacctggattcgtaattttgagcctggcact
tgtcgtgatcatgaagctaaactcattaactacaagaactttgttaacaaagagcttata
ttgttctcaagggcagatctccagaggtccattccctctatggttgatggccttaaacct
ggtcaaaggaagattcttttctgctcatttaagaaaaaattggtaaaagaaatcaaagtt
ggccaatttattggttatgtgtctgagcactctgcttaccaccatggtgaacaaagtctt
gctagcacaattattggaatggcacaagattttgtgggtagcaacaacatcaatcttctc
aaaccaaacggtcaatttggtactcgaaacttgggtggtaaagaccatgcaagttccaga
tacatttacactgagctaaatactgttactcgttgtctcttccacgaagatgatgataag
cttcttgagtacttgaatgaggagggaaggtccattgaaccaaactggtacataccaatt
atacccttggttcttgtcaatggcagtgaaggaattgggacaggttggagttcttacatt
cccaactataatccaaaggaaattattgccaacgttaggcgtttgttaaatgaagaggaa
atggtgccgatggatccatggtacagaggatttagaggaaccattgagaaaagcgcgaag
gaaggaggctatatagtcagtggctcagtggtggaaatagatgaacaaactttcagaatc
acagagcttcctgtacggaagtggactcaagattacaagcagttccttgaatccataact
gatgggacgcctaatgtcaaggatcctctcattgaggatttcaggcaaaatggggatgat
gcaattgtagacattgaagtcaagatgaagcctgaaaaaatagcttcaatcatgcaagaa
ggactattcaagaaatttaaattgactaacactattagcacaagtaacatgcatcttttc
gatgcagagggaaaaattaagaaatttgacactccagaacaaattcttgaagagttttat
ccactacggatggagtattatgagaggagaaagaaatatatactggccaaccttgaacgc
cttttgttgattttggacaacaaagtcaggtttatattaggggttgtgaacggagaaatt
attgtgagcaaccggaaaaaagctgaattattgattgagctgaagcagaaaggttttact
cccatacggaaaggtaaatctgcagaaccacaagttgcaggggcaaatgatgacaattca
gaagggcaggaagatgagcaggaaactgtatcccggcctgtcagtgttgaaggagcaaca
tggggtgactacgagtatcttttatccctatctattggaactttgacccttgaaagtgtg
cagaagctgctagatgaaaaggctgaaaaggaaaaggagtatgagattttgatgggaacc
ccaacaaagtcattgtggttgaaggatttggatgattttgaaaagaaacttgatgagcta
gatagcaaagaggcagaagatgatcgaaagagatcaagccaagaaagtaaaaagacagcc
aatggttttgctgctaaacccgcaaagaagccaccacaaccacgaaagaacactaagaag
aacaaagatgttgagccagagaatgataattattcaatggaaattgagaatgctgttgaa
gttgtaaaaccaaaaggacaagcaggctctaagaatactcagaagaaagctggcgatgaa
agcgatattccatctcttcaagaacgcctagctgcgtataactttgaatcatctggtgaa
aagtcaggagccatggaaagtgatgaacctgtgcctgctgggaagaaacagattaacaaa
aggggtggtgccaaaaagatgtcaagtaccatagttttgggatcagatagtgataatgaa
aatgatgacaacttcgaagtacaacagaaggctgccccagctaagaagggagggagaaag
cctgctgctcaaaatgccaaggcacctgccttgcccaagaaaagaaatgtaggcaccaag
caaacattgggtaaaaaattattaactggtatgttgcagccagctgaaagtacagctaca
tcaccaaagaagaaagtgagaaagacgggggagtcttcaattgaagatttgtctgcaggt
tctgcttctaactctcctatctcagaggatgaggtggttgagatcgcaccacagccagca
agggaaagacctcagagggctaatcgtactcaaaagatatatgtagtgagtgaatccgag
agtgacaatgactctgatgaggatgcagaattatcagatatggaagaagatgacgactag
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integrated database retrieval system
