KEGG   Trifolium pratense (red clover): 123909761
Entry
123909761         CDS       T08949                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03420  Nucleotide excision repair
tpra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    123909761
   03460 Fanconi anemia pathway
    123909761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpra03032]
    123909761
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123909761
DNA replication proteins [BR:tpra03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    123909761
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123909761
SSDB
Motif
Pfam: ERCC4 DUF6667
Other DBs
NCBI-GeneID: 123909761
NCBI-ProteinID: XP_045816604
LinkDB
Position
LG2:complement(64346593..64352022)
AA seq 1023 aa
MQQVHSSFSISNQRIIQNHSIVSQIEVENLHPLPSSSSSMVLQFHEHIITELLEDTNGGL
VILSSGLSLSKLISSLLLLHSSSQGTLLILSPPSSTLKSKINFHLKTLNPQFYQIPAEIT
ADLPIHHRHSLYTSGSVFFITPRILIVDLLTKKLPTSTISGLIILNAHSISETSTEAFIV
RIFRSVNRDAFIRVFSDRPQAMVSGFAKAERTLKCLHIRKMHLWPRFQVYVSQELERDPP
DVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQL
DPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASY
KIFDYAKKRVYHLVRSDGVKLNESSKGVKNKKKKVKGDNKETEEADVDSSTSSNHGIVLE
EVLEEAPKWKVLRDILEEVEEERQKQGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEE
CITNSPKKVMRDEWKKYLLNKVQLRDVVHKKKKPTDPKGFGILDGVTPISPAKNSETSGI
NKQEHDALLAAASKLRNLAENNHVVEDAPQSDLGGHVRKGKRKLGNRNAPIVIDGSGVQS
KNKEEVASGKTGTSDSKNKAHMGETSPVIAGRFCETKHGGISVEDTVLRRHSCPDAVGRD
GKSLPPVHFYALESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENPSKRLKVYFIFYE
DSTEVQKFEASIRRENGAFESLIRQKSMMTIPVDRSGHGLGLNSTLDSDLNTTQNSITRK
AGGRKGVDKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQD
LFQSFTSGRLYTQVETMARYYKIPVLLIEFSQDKSFSFQSAGDIGDDVTPNSIISKLSLL
ALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNT
SAVEFLRRLPGVTDSNYRAIMDGCKSLEELALLPVEKLAEIMGGHKAARTLRDFLDAKYP
TLL
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgcaacaagttcattcgagtttttcaatttcaaaccaaagaattatacaaaatcatagt
atcgtttcacaaattgaagtagaaaatttgcatccactaccatcatcatcatcatcaatg
gttcttcaatttcacgaacacataatcacagagcttctagaagataccaatggcggtctc
gttattctctcttcaggtctctctctatccaaactcatatcatctcttctccttctccat
tcatcttcacaaggaacactcctcattctatctcctccttcctccactctcaaatccaaa
atcaatttccatctcaaaaccctaaacccccaattctatcaaatccccgccgaaatcacc
gccgatctccccattcaccaccgtcactctctctacacatccggttccgtctttttcatc
actcctcgaatcctaatcgttgatcttctcacgaaaaaactacctacatcaacgatttcc
ggacttattattctcaacgctcattcgatttctgaaacttctactgaagcttttattgtt
aggattttccgttccgttaaccgtgatgcatttattcgtgttttctccgataggccgcag
gcgatggtttctggtttcgcgaaggcggagaggactttgaagtgtttgcatataaggaag
atgcatttatggccgaggtttcaggtttatgtttcgcaggagcttgagagggatccaccg
gatgttgtggatattagggttccgatgagtaagtatatggtggggattcagaaggctatt
attgaggttatggatgcgtgtttgaaggagatgagaaagacaaataaggttgatgtcgag
gatttgacggtggagaatgggttgtttaagtcttttgatgagattgtgaggagacagttg
gatccaatttggcataccttggggaagaagactaagcagcttgtttctgatcttaagacg
ttgaggaagttgttggattatctagtcaggtatgatgcggtgacatacttgaaatatttg
gatacacttagagtgtcagagagttttcgatctgtttggatatttgcagaggcgagctat
aagatatttgactatgcaaagaaacgtgtttatcatcttgtgaggtcagatggtgtgaaa
ttgaacgagtctagtaagggtgtcaaaaacaaaaaaaaaaaagtcaagggggataacaaa
gaaactgaagaagctgatgttgattcctcaaccagttcaaatcatggcatagttttggag
gaagtcttggaagaagcaccaaagtggaaggtcttacgtgatattcttgaagaggtagag
gaggaacggcaaaagcaaggcatgttgagggaagaagtgttggctgaaggcgaagacacc
gacaatggcattgtattagtggcatgtaaagatgaaaggtcgtgcttgcagcttgaagaa
tgcatcaccaacagtccgaaaaaggtcatgagagacgaatggaagaagtacttactaaac
aaggtacaattacgtgatgtagtgcataagaaaaagaagccaacggatcctaaaggtttt
gggatacttgatggagtcactcccatatctcccgcaaagaattctgaaaccagcggcatt
aataagcaggagcatgatgcacttcttgcagcagcttcaaaactgcgaaatcttgctgaa
aataatcatgttgtcgaagatgctcctcagtctgatttgggtggacatgttcgaaaagga
aagagaaaattgggaaatagaaatgccccaatcgttattgatggctcaggtgttcagagt
aagaataaggaggaagtggcaagtggtaaaactgggacgtcagattcaaaaaataaagcc
catatgggtgaaactagtcctgtcattgctggcagattttgtgaaaccaaacatgggggg
atatctgtagaagacacggttcttcggaggcatagctgtcctgatgcagtgggaagagat
gggaagtcactaccgccagtacatttttatgccctagaaagtgatcagcctatactggac
atattaaagccctctgtaatcattgtttaccatccagacatgacctttgtaagagaaatt
gaagtatacaaagctgagaatccctcaaaaaggttgaaggtttattttattttctatgaa
gattcaactgaggttcagaagttcgaggcaagtatacgtagagagaatggagcatttgaa
tctttgatcaggcaaaaatctatgatgacgattccagttgaccggagtgggcatggttta
ggattgaattctaccctagattcagatttaaatactacccagaactcaataaccagaaaa
gcaggtgggagaaagggggttgataaggaaatgcaggtcattgtggacatgagggaattc
atgagcagccttccaaatattcttcatcaaaagggaatgcgcataattcctgtgaccctt
gaagttggtgactatatcctatcaccattaatttgtgtggaaagaaaaagtattcaagat
ctcttccagagtttcacatcaggtcgtctatacacccaggtggaaacaatggcgcgatat
tataagatacctgtgctcttgattgagttttcacaggataagagcttctcatttcagtct
gctggtgatattggtgatgatgtgacacccaatagcattatatcaaagttgtcgttgctt
gctctacattttccccgactacgaataatctggtctcgaagtttgcatgctacttctgaa
atatttgcttcactgaaggcaaatcaagatgaaccagatgaaacaaaagcaatgagagtg
ggtgttccatcagaagaaggaattgtggaaaatgacgtgagggcggaaaattacaataca
tcggctgtggagtttctaagacgacttccaggtgttacagattctaattatagagccata
atggatgggtgtaagagtttggaagaacttgctcttcttccggtggaaaagctagctgaa
ataatgggtggtcataaagctgctcgtacccttagagactttttagatgctaaatatccc
actttgttgtga

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