Trifolium pratense (red clover): 123910006
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Entry
123910006 CDS
T08949
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123910006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123910006
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123910006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
123910006
NCBI-ProteinID:
XP_045816985
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Position
LG2:52129516..52134180
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AA seq
385 aa
AA seq
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MFGAQSSSSLFGTPSSTPAFGTPSSTPAFGTPGFGTPSSFGTPGFGTPSSTPAFGASSTP
AFGSSSLFSSPFPSQQQQQQQQQQTSLFQQSPSTGFGFQNSLATPQTASFPNSQLTTQMA
NVAPVPFSLADRDIQAILDSYKEDAGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAM
GKLEGMESADRERLWPQHVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQAD
TLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSG
AELSRRVQNLLGVSRVKANSNGFGNSVHLPGSTKIHDQSLANLQEVLQQQMDAIARLGSV
MKRDARDLEIMMAEDTGTPENGHLM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagctcaatcttcttcttctctcttcggaaccccttcttcaaccccagcattc
ggaactccatcttctactcccgcattcggtaccccagggttcggaactccatcttcattc
ggtaccccagggttcggaaccccatcttcaacccctgcttttggagcttcttctactccc
gctttcggcagttcttccctcttctcctcaccgttcccttctcagcaacagcagcagcaa
cagcaacagcagacttcactttttcaacaatcgccttctactggtttcggatttcagaat
tctcttgcaacgccgcaaactgcttcgttcccaaattctcaattgactactcaaatggct
aatgtagctccagttccattctctctagccgatcgcgatattcaagcaatccttgattct
tataaggaagatgctggaaaccccaagtatgcttttaagcatttgttattcagtgtaaca
gatccacaatttagggtgaaacctgccggtgtttcagatatcatgtgggcggaagcaatg
ggaaagcttgagggtatggaaagtgctgatagagagcgtctgtggccacaacatgttcag
ggttttaaggatctttcccagcgccttaagctccaagacgaagtcattgtctctgatgca
gagagattaagtgtaacccaaagcaatgttaaaatgctccaaagacattttcaagctgat
actcttccttggattcaaagactaaaacagaaagaacagattcttcagcaacgtatttta
agagtgatgagaatagtcgaggcgttggagggaaaaggctgccgtatccccttaacaaaa
ggggaagctgaacttgctgagaaattagccacaataactagacagcttaaaggatctgga
gcggaattatctagaagggtacaaaatctactcggtgtatctcgtgtcaaggctaatagc
aatggatttggcaactccgttcatcttccgggctcaaccaaaattcatgatcagagtctg
gctaacctgcaggaggttttgcaacagcagatggatgccatagcaagacttggcagtgtt
atgaagcgagatgcacgggatttggagattatgatggctgaggacacaggaacgccagaa
aatggacatttaatgtaa
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