Trifolium pratense (red clover): 123910075
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Entry
123910075 CDS
T08949
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123910075
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123910075
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123910075
04121 Ubiquitin system [BR:
tpra04121
]
123910075
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123910075
Peptidases and inhibitors [BR:
tpra01002
]
Metallo peptidases
Family M67
123910075
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Others
123910075
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
123910075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
123910075
NCBI-ProteinID:
XP_045817069
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All DBs
Position
LG2:complement(20446820..20451120)
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AA seq
235 aa
AA seq
DB search
MELHKSFLDHKVTKSSPSPALCCVETVSQDEQNSHITAYNSGDGSTNSYNESSSSKTVRD
VHISMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCNATNE
EEVFTILNDRSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIPEAFAIVLAPTDTSRSC
GLFRLTEPDGMNILKNCPETGFHPHKEPDNGSPVYEHCSNVYKNSNLRFEIFDLR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaactccataaatcctttttagatcataaagtaaccaagtcctcaccttcgcctgcc
ctctgctgtgtggagacagtgtctcaagatgaacaaaattctcatattacagcttataat
tcaggagatggatccacaaactcatataatgaatcttcttcatcaaagaccgtgcgcgat
gtacatatttcaatgcggttaatggaggattttcttgatcttgctaaagaaaatacagaa
aaggatctggaaacatgtggtatacttggtgcctttcttgagaaaggaaccctctacatg
actacactaatcataccgaagcaggaatcggcatctaattcatgtaatgccacaaatgag
gaggaagttttcacaattctaaatgacagatccctctatcctgttggatggatccatacg
cacccttctcaaagttgtttcatgtcatcggtggatctgcacactcaatattcctaccag
gcgatgattcctgaggcatttgccattgtattggcgccaactgatacctcaaggagctgt
ggactctttcgcctaaccgaacctgatgggatgaatattctgaaaaattgccccgagacg
ggatttcatccacacaaagaaccagataatggaagccctgtgtacgagcactgctccaat
gtgtacaaaaactccaatctaaggtttgaaatctttgatttacgctaa
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