Trifolium pratense (red clover): 123910168
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Entry
123910168 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123910168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123910168
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123910168
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
123910168
NCBI-ProteinID:
XP_045817186
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Position
LG2:complement(58263846..58275363)
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AA seq
786 aa
AA seq
DB search
MAEFGKDEVPILSDTIPKQSNEPDDSKFPSLVPRTRSVSISIPMIPMDPYERDTNLRGHT
GPLRSKRKTPFSPMSGPLYVTHRPENLFWQNMVAQRSNAVESKTEKFPLCNIMSGHDLQN
NYAGKNEHLVRSGPLGMCNDPYCTTCPTYFKATQQMDSKNSGLFNPKNAFYGDAKDWARR
IFAFLIPNVPRVMNPHNKLVQQWNKFFAICCLVAIFVDPLFFFLLSVNKERKCIVIDSTI
TTVLILLRSTNDFIHFLNIILQFRLAYVAPESRVVGAGELVDHPKKIARHYLQTYFLFDL
FVVLPLPQIMILFFLPKHLGTSGANHAKNLLRGAVLAQYMPRLCRFLPMLISPSGFIFES
AWASFFINLFTFMLSGHVVGSWWYLFGLQRVNQCLRSACKKTYFHECSKFIDCGHGGSEY
HHQNETNLFNWRKNENASACFTEDYFEYGIYLKAVNLTTKHNVLTRYVYSSFWGFQQIST
LAGNLSPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRQRDVEQWM
SHRRLAQDLRRRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFVKKVRIFSL
MDEPILDAICERLRQKIYIKGSKILYDGGLVEKVVFIVRGKLESIGEDGIRVPLSEGNVC
GEELLTWCLEHASGNKGCGKTRIPRQRLVISNRTVLCLTNVEAFSIRAADLEEVTSIFAR
FLRNPGVQGAIRYESPYWRCLAATRIQVAWRYKKKRLCRANTSQSNNEASKYHFCDIKVS
HTKWRD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttgggaaagatgaagtgccaattctctcagatactattccaaaacaatca
aatgaacctgatgattccaaattcccgagtcttgtacctaggacgcgaagtgtttcgatt
tccattccaatgatacctatggatccatatgaaagagatactaatcttagaggacacact
ggtcctctaaggagtaaaagaaaaacaccatttagtccaatgagtggtccattatatgtt
actcatagacccgaaaatcttttctggcagaatatggtcgcgcagaggagcaatgcagtg
gaaagtaagacagaaaagtttcctttatgtaacattatgagtggacatgatttgcagaat
aactatgctggtaaaaatgaacatttagtaaggtctggtccattgggaatgtgtaatgat
ccatactgtacaacttgtccaacttactttaaggctactcaacaaatggattcgaaaaat
tcgggtttgttcaatcctaagaatgccttctacggtgatgcaaaggattgggcaagaaga
atttttgctttcttgattccgaatgtacctagagttatgaatccacataataaacttgta
caacaatggaataaattttttgcaatttgttgcttggtggcaatttttgtggatccatta
tttttcttcttgctgtctgtgaataaggaacgtaaatgtattgttattgactcgactatc
acaacagtgcttattttacttagaagtacgaatgatttcatacatttcctaaatattatt
cttcagtttaggttggcttatgtagctcctgagtctagggtggttggtgccggggagttg
gttgaccatcctaagaaaattgctcgtcattatctccagacatattttctttttgacttg
tttgttgtacttccacttcctcagataatgatattgtttttcctaccaaaacacttggga
acatcgggcgcaaatcatgcgaagaatcttttgcgcggcgccgtccttgctcagtacatg
cccagattgtgtagatttcttcctatgctaatttctccgtcagggttcatatttgagtca
gcatgggcaagtttcttcataaatctttttacgttcatgctatctggccatgttgttggg
tcatggtggtatctcttcggtttgcagagggttaatcaatgtctacgaagtgcgtgcaag
aaaacatattttcatgaatgctcaaaattcattgattgtggacatggaggcagtgagtac
catcatcaaaatgaaacaaatttgtttaattggaggaaaaatgagaatgcgagcgcttgt
tttacagaagattattttgaatatgggatttatcttaaagctgttaaccttactacaaaa
cataatgtgctcacaagatatgtatattcatcattttggggatttcagcaaattagcact
ctagctggaaatttgtcaccaagctattttatttgggaagttctttttactatgggaatt
attggattaggactcttgctttttgctcttctcattggtaacatacaaaactttcttcag
gctcttggaagaaggaggctagaaatgtcacttagacaacgcgatgttgagcaatggatg
agccataggcgcttagcacaagacctgagaaggagagtgcgacaagcagaacgttataat
tgggctgcaacgagaggagtgaatgaagaaatactcatggagaatttaccagaagatctt
cagagggacatcagacgtcatctctttaaatttgttaagaaggttcgaattttttccttg
atggatgagccgatattggatgccatttgtgagagactaagacaaaaaatatatatcaaa
ggaagcaaaattttgtatgatggtggcttggtagagaaagtggtttttattgttcgcgga
aaattggaaagtattggtgaagatggaattagagttcctttatcggagggcaatgtttgt
ggtgaagaacttctgacatggtgtcttgagcatgcttcaggaaacaaaggttgtggaaaa
acaagaattccaagacaaaggttggtaattagcaataggacagtattgtgcctaacaaat
gtggaggcattttcaattagagcagcagaccttgaagaagttacaagtatttttgcaaga
ttcttgaggaatcctggtgttcaaggagccataaggtatgaatcaccttactggagatgt
cttgcagcgacgcggattcaggttgcatggagatacaaaaagaaacgcctttgtcgcgct
aacacttcacaatcaaataatgaagcatcaaagtatcatttctgtgatatcaaagtatca
cacacaaagtggagggactga
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