Trifolium pratense (red clover): 123910169
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Entry
123910169 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123910169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123910169
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123910169
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
123910169
NCBI-ProteinID:
XP_045817190
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Position
LG2:complement(58240288..58265450)
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AA seq
773 aa
AA seq
DB search
MNHFDKDEIPMLSESPTQRSDEPQDSTFRRNISSTRSASSSTRSASISIPMASLDQYERQ
PNLVRHTGPLRTARKTPLGQMSGPLYATPATGNPFQNSIVVAGKKVGENKTEKFDGTDEH
RWNDNDYDKKNEHLLRSGQLGMCSDPYCTTCPTYFKVSQQTNQRASVILDPKFHNSLYGD
AKGDTKGYGRKLYSFCSSCIPGVMNPHNKVVQHWNKFLAIFCLVAIFVDPLFFFLIYVNK
DEKCICINWTMANTLVSIRSITDIVYFLNILLQFRLAYVSPDSRVVGAGDLVDHPKKIAL
NYIKSYFFFDLFVVAPLPEIMIFFILPISLGLLGANYTKNILRLAILVQYIPRLFRFLPL
LIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHLSELVGC
KELIDCDANAPNETAPQWRNNTRANDCLNPTSGVFAYGIYGSAVQLTIETRVINKYVYAL
FWGFQQISTLAGNQTPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQSLGRRRLEMQL
RGRDVEQWMSHHRLPEDLKRRVRQAERYSWAATKGVPEKMVLNNLPEDLQTDIRRHLFKF
VKSVRIFSLMDEDEPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDG
IPVPLTEGDACGEELLRWYLEQSSESKECKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKD
IEEVTTLFARFLRSPRVQGVIRYESPYWKSLAANRIQVAWRYRKKRLNRATTT
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattttgataaagatgaaattccgatgctgtcagaatcacctactcaacgatct
gatgaacctcaggattctacattccgaagaaacatatcaagtacacgaagtgcttcatca
agtacacgaagtgcttcaatctctattccaatggcttctctggatcaatatgagagacag
ccgaatcttgtcagacatactggtccacttcgtactgcgaggaaaactccgttggggcaa
atgagtggtcccttatatgcaactcctgcaactggaaatccttttcagaatagtatagta
gtggcaggaaagaaagtaggagagaacaagacagagaagtttgatggcacagatgaacat
cgttggaatgataatgactacgacaaaaaaaatgagcacttgttgaggtctggacaactc
ggaatgtgtagtgatccttattgcactacttgccctacttacttcaaggtttctcagcaa
acaaatcaaagagcttccgttatacttgatcccaagttccacaattctctttatggcgac
gccaaaggagataccaaaggttatgggagaaaactttattctttctgttcttcatgtatt
cctggagttatgaaccctcataataaagttgtacaacattggaacaagtttttggccata
ttttgcttggtcgcaatttttgttgatccattatttttcttcttaatttatgtgaacaag
gatgagaaatgtatatgtatcaactggacaatggcaaacacgcttgtttcaattagaagc
ataactgatattgtgtatttcttgaatattcttctccagtttaggttggcatatgtttct
cccgattcaagggtggttggtgctggtgatttagttgaccatcccaagaagattgctctt
aattacattaagagctattttttctttgacttgtttgttgtagcacctcttcctgagata
atgatattttttatcctaccaatatccttggggttattaggagcaaattatacgaagaat
attctacgtctagcgatccttgtacaatatattcccagattattcagatttttgcctctg
ctaattggccagtctccaacaggattcatatttgagtcagcttgggcaaatttcattata
aatcttctcatttttatgctatctggccatgtcgttggttcatgttggtacctctttggt
ctacagagggttaaccaatgtttgcgagatgcctgtcatctttctgaactagtgggatgc
aaggaattgattgattgtgatgctaatgcgcctaatgaaacagctccgcagtggagaaac
aatactcgcgctaatgattgtttgaatcccacatctggtgtttttgcttatggaatctat
ggctctgccgtacaacttactatagaaactagggtgattaacaaatatgtgtatgccttg
ttttggggattccagcaaatcagtactctagctggtaatcaaaccccgagctattttgtg
tgggaagtcctctttacaatgtctatcataggattgggactcttgctttttgcgcttctc
attggaaacatacagaactttcttcagtctcttggacggaggaggttagaaatgcaactt
agaggccgtgatgttgagcaatggatgagccatcatcgcttaccagaagatcttaaaagg
agagtacggcaggctgaacggtatagttgggctgcaacaaagggtgttcctgagaaaatg
gttctcaataatttgccagaagatctccagacagacataagacgccacctcttcaaattt
gttaaaagtgttcgaattttttccctgatggatgaggatgagcctatcttagacgccatt
cgtgagagactaattcagacgacatacattaaaggaagtaaaattttgagtcagggaggt
ctcgtacagaagatggtatttattgtgcgtggaaaattggagagcatcggagaagatggt
attccagttccgttaaccgaaggggatgcttgtggtgaagaacttctaagatggtatctt
gaacagtcttctgaaagcaaagaatgtaaaaaagtaaagcttcaaggacaagggttgact
agtgatagaacagtaagatgcttaaccaatgtagaggcattttcactccgcactaaagac
attgaagaagtcacaactctttttgcaagattcttgcggagccctcgtgttcaaggagtc
ataaggtatgaatcaccatactggaaatcacttgcagcaaacagaattcaggttgcatgg
agatacaggaagaagcgtctaaatcgagcaactaccacataa
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