Trifolium pratense (red clover): 123910170
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Entry
123910170 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123910170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123910170
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123910170
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
123910170
NCBI-ProteinID:
XP_045817192
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Position
LG2:complement(58215742..58239279)
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AA seq
768 aa
AA seq
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MNRFDKDEIPMLSDTRTQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHT
GPLRTARKTPLGQMSGPLYATPATGNPFQNSIVVAGSKVGENKTEKFDGTDEHRWNDNDY
DKKNEHLLRSGQLGMCNDPYCTTCPTYFKLSQQRKPRASTIFDPKFHNSLYGDAKGFGRK
LISFCSSCIPGVMNPHTKVVQHWNRFLAISCILSIFVDPLFFFLIYVNKRDKCILINWDM
AKILVVLRSITDFVYFLNILLQFRLAYISPESRVVGAGDLVDHPMKIALNYFRSYLCVDL
FVVLPLPQIMILVILPSSLGYSGANYAKNLLRLAILIQYIPRLFRYLPLLIGQSPTGFIF
ESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACKHSLLPECMKLIDCKAESI
STKWINDEGAIACLDSSSNAFSYGIYEKAVQLTIETNLINKYVYALFWGFQQISTLAGNQ
IPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRL
PEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVKKVRIFSLMDEDE
PILDAIRERLIQTTYIKGSRILSQGGLVQKMVFIVRGKLESIGEDGISVPLSEGDACGEE
LLRWYLEQSSESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTTLFARFLRS
PRVQGVIRYESPYWRSLAANKIQVGWRYRKKRLSRANTTQNDYQTSKS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttttgataaagatgaaattccgatgctgtcagatacacgtacacaacgatct
gatgaacctcaggattctacattccgaagaaacatatcaaggacacggagtgcttcaatc
tctattcctatggcttctctggatccatatgagagacagccgaatcttgtcggacatact
ggtccgcttcgtactgcgaggaaaactccgttggggcaaatgagtggtcccttatatgca
actcctgcaactggaaatccttttcagaatagtatagtagtggcaggaagcaaagtagga
gagaacaagacagagaagtttgatggcacagatgaacatcgttggaatgataatgactac
gacaaaaaaaatgagcacttgttgaggtctggacaacttggaatgtgtaatgatccttat
tgcactacttgccctacttacttcaagctttctcagcaaagaaaaccaagagcttccact
atatttgaccccaagttccacaattctctttatggcgacgccaaaggttttggaagaaaa
cttatttctttctgctcttcatgcattcctggagttatgaaccctcatactaaagttgta
caacactggaaccggtttttggccatatcttgcatactctcaatttttgttgatccatta
tttttcttcttaatatatgtgaacaagcgtgataaatgtattcttatcaactgggatatg
gcaaaaatacttgttgtacttcgaagcataactgattttgtgtatttcttgaacattctt
ctccagtttaggttggcttatatttctcctgaatcaagggtggttggtgctggagattta
gttgaccatcccatgaaaattgctcttaattactttaggagttatctttgcgttgactta
tttgttgtattacctcttcctcagataatgatattggttatcctaccaagttccttgggg
tattcaggagcaaattatgctaagaatcttctacgtctagcgatccttatacaatacatt
cccagattattcagatatttgcctctgctaattggccagtctccaactggattcatattt
gagtcagcctgggcaaatttcattataaatcttctcatttttatgctatctggccatgtt
gttggttcatgctggtacctctttggtctacagagggttaaccaatgtttgagagatgcc
tgcaaacattctcttctacctgaatgcatgaagttgattgactgtaaagcggagagtata
tcaactaaatggatcaatgatgagggtgccattgcttgtttggattcctcatccaatgct
ttttcttatggaatctatgaaaaagctgtacaacttactatagaaactaacctgatcaac
aaatacgtgtatgcacttttttggggattccagcaaatcagtactctagctggtaatcaa
atcccaagctattttgtgtgggaagtcctctttacaatgtctatcataggattgggactc
ttgctttttgcgcttctcattggaaacatacagaactttcttcaggctcttggacggagg
aggttagaaatgcaacttagaggccgtgatgttgagcaatggatgagccatcgtcgctta
ccagaagatctcaaaaggagagtacggcaggctgaacggtatagttgggctgcaacaagg
ggtgttcctgagaaaatggttctcgagaatttgccagaagatctccagacagacatacga
cgtcatctcttcaaattcgttaaaaaggttcgaatattttccctgatggatgaagatgag
cctatcttagatgccattcgtgaacgactaatacagacaacatacatcaaaggaagtaga
attttgagtcagggtggtcttgtacagaagatggtgtttattgtgcgtggaaaattggag
agcatcggagaagatgggatttcggttccgttatctgaaggggatgcgtgtggtgaagaa
cttctaagatggtatctggaacagtcatctgaaagcaaagaaggtaaaaaagtaaagctt
caaggacaagggttgaccagtgacagaacagtaagatgcttaaccaatgtggaggcattt
tcactccgcactaaagacattgaagaagtgacaactcttttcgcaagattcttgaggagc
cctcgtgttcaaggagtcataaggtatgaatctccatattggagatcacttgcagcaaac
aaaattcaggttggatggagatacaggaagaagcgtctaagtcgagctaataccacacag
aatgattatcaaacatcgaaatcatag
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