Trifolium pratense (red clover): 123910172
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Entry
123910172 CDS
T08949
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123910172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123910172
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123910172
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Motif
Pfam:
Ion_trans
cNMP_binding
bPH_8
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
123910172
NCBI-ProteinID:
XP_045817196
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Position
LG2:complement(58230189..58239268)
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AA seq
759 aa
AA seq
DB search
MNHVDKDESPMLSETRTQRSDEPQDSTFRRNISRIQSASISIPMDSLDPYERQPNLVGHT
GPLRTARKTLLGQMSCPLYATPATGNPFQNSIVVAGSKVGENKTDKFDGTDEHRWNDNDY
DKKNKRLLRSGQLGMCNDPYCTTCPTYFKFSQERKPRSSTIFDPEFHNSLYGDAKGFGRK
LLSFCSSCIPGVMNPHTKVVQHWNQFLAISCILSIFVDPLFFFLIYVNKRDKCILINWDM
AKILIVLRSITDFVYFLNILLQFRLAYISPESRVVGAGDLVDHPMKIARNYFKSYLGVDL
FVVVPLPQIMILVVLPSSLGNSGANYAKNLLRLAILIQYIPRLFRYLPLLIGQSPTGFIF
ESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACKHSLLPDCMKLIDCKAESI
STKWINDEGASACLNSSSDAFAYGIYDKAVHLTIETNLIKKYVYALFWGFQQISTLAGNQ
TPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQSLGRRRLEMQLRGRDVEQWMNHRRL
PEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVKSVRIFSLMDEDE
PILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDGIPVPLTEGDACGEE
LLRWYLEQSSESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTILFARFLRS
PRVQGVIRYESPYWKSLAANRIQVAWRYRKKRLNRATTT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgttgataaagatgaaagtccgatgctgtcagaaacacgtacacaacgatct
gatgagcctcaggattctacattccgaagaaacatatcgaggatacaaagtgcttcaatc
tctattcctatggattctctggatccatatgagagacagccgaatcttgtcggacatact
ggtccgcttcgtactgcgaggaaaacactgttggggcaaatgagttgtcccttatatgca
actcctgcaactggaaatccttttcagaatagtatagtagtggcaggaagcaaagtagga
gagaacaagacagataagtttgatggcacagatgaacatcgttggaatgataatgactac
gacaaaaaaaacaagcgcttgttgaggtctggacaactcggaatgtgtaatgatccttat
tgcactacttgccctacttacttcaagttttctcaggaaagaaaaccaagatcttccact
atatttgaccccgagttccacaattctctttatggcgacgccaaaggttttggaagaaaa
cttttatctttttgctcttcatgcattcctggagttatgaaccctcatactaaagttgta
caacattggaaccagtttttggccatatcttgcatactctcaatttttgttgatccatta
tttttcttcttaatatatgtgaacaagcgtgataaatgtattcttatcaactgggatatg
gcaaaaatacttattgtacttagaagcataactgattttgtgtatttcttgaacattctt
ctccagtttaggttggcttatatttctcctgagtcaagggtggttggtgctggagattta
gtcgaccatccgatgaaaattgctcgtaattactttaagagttatcttggcgttgactta
tttgttgtagtacctcttcctcagataatgatattggttgtcctaccaagttccttgggg
aattcaggagcaaattatgctaagaatcttctacgtctagcgatccttatacaatatatt
cccagattattcagatatttgcctctgctaattggccagtctccaactggattcatattt
gagtcagcttgggcaaatttcattataaatcttctcatttttatgctatctggccatgtt
gttggttcatgctggtacctctttggtctacagagggttaaccaatgtttgagagatgcc
tgcaaacattctcttctacctgattgcatgaagttgattgactgtaaagcggagagtata
tcaactaaatggatcaatgatgagggtgccagtgcttgtttgaattcttcatccgatgct
tttgcttatggaatctatgataaagctgtacaccttactatagaaactaacctgatcaag
aaatacgtgtatgcacttttttggggattccagcaaatcagtactctagctggtaatcaa
accccaagctattttgtgtgggaagtcctgtttacaatgtctatcataggattgggactc
ttgctttttgcgcttctcattggaaacatacaaaactttcttcagtctcttggacggagg
aggttagaaatgcaacttagaggccgtgatgttgagcaatggatgaaccatcgtcgctta
ccagaagatcttaaaaggagagtacggcaggctgaacggtatagttgggctgcaacaagg
ggtgttcctgagaaaatggttctcgagaatttgccagaagatctccagacagacataaga
cgccacctcttcaaatttgttaaaagtgttcgaattttttccctgatggatgaggatgag
cctatcttagacgccattcgtgagagactaattcagacgacatacattaaaggaagtaaa
attttgagtcagggaggtcttgtacagaagatggtgtttattgtgcgtggaaaattggag
agcatcggagaagatggtattccggttccgttaaccgaaggggatgcttgtggtgaagaa
cttctaagatggtatcttgaacagtcttctgaaagcaaagaaggtaaaaaagtaaagctt
caaggacaagggttgactagtgatagaacagtaagatgcttaaccaatgtagaggcattt
tcactccgcactaaagacattgaagaagtcacaattcttttcgcaagattcttgcggagc
cctcgtgttcaaggagtcataaggtatgaatcaccatactggaaatcacttgcagcaaac
agaattcaggttgcatggagatacaggaagaagcgtctaaatcgagcaactaccacatga
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