Trifolium pratense (red clover): 123910354
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Entry
123910354 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123910354
KO
K10756
replication factor C subunit 3/5
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03030
DNA replication
tpra03410
Base excision repair
tpra03420
Nucleotide excision repair
tpra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123910354
03410 Base excision repair
123910354
03420 Nucleotide excision repair
123910354
03430 Mismatch repair
123910354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123910354
03036 Chromosome and associated proteins [BR:
tpra03036
]
123910354
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123910354
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123910354
DNA Replication Termination Factors
ELG1-RFC complex
123910354
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123910354
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123910354
Check point factors
HRAD17(Rad24)-RFC complex
123910354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
DNA_pol3_delta2
RFC_C
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
123910354
NCBI-ProteinID:
XP_045817406
LinkDB
All DBs
Position
LG2:12066881..12070234
Genome browser
AA seq
726 aa
AA seq
DB search
MEKTRLNNLFPLTPSSTFSTKKGRSGYEPSDTETEWQDTPRYERGGRNNVTLSPEETRVT
SVRNKSPMTLHKRRLSRFEFEVPSSPSVTGSVLSQPRRRHHSKSPYRPRIAQDDGNNDDD
SLSYITGLNSRRNTSPLPRPDFGRTVSPYNRTHEQRTPSNENRKASSGFLEVDRVSTKPN
YRRAVTAPRLRDQEQTLQNTRMLKQREKSPFKTGPVREREINEMIAEVKLSKNPTDDYSS
ALESTDSIQTGDLFFSRECNALQAKNSALPKKVQQYGYFSPRPVITDINPISNPSEVRSN
LNMNMPRNSSNVLLSRTTRVTSIRKGSGTGKTHTNPSVKSDASAKTTDSMRKFTSNRKKN
QKDAWFACMMRTGNCKISRKSPERKPIDEASLIERAIIVESIPQFWADKHQPASLNGFIC
NKQEAQLLKELVSSQGSCPHILLKGPSSSEKGELAMALLREIYGDACSNDKRTMKVSVPI
TSSSHHMELNVNSEPNAKYALMGLIKEISNIYAITPEVSNANFKSDYKVIILYEVDKAVE
NIQHLIKWIIDRYSDICKLVLCCEDDENIIAPVKTRFKVINVDAPQTHEIIEALTQIANK
EEIDLSMNFAMKIATKSKQNLREAILALETCRAHNYPFSEEQPIPVGWEKIVIEVSVEIL
TDPSFSRLLSIRGKFQMLLLDFVHPRLILLKLVEQLLRKTDAGLKRELYYWHAYYVSNDF
SSYNLS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacgcgactaaataacctatttcctctaactccaagttccacattctcgacc
aagaagggacggagtggatatgaaccatcagacacggagacagagtggcaagatactcca
cgctatgaacgaggaggaagaaataacgtaactttgagtcccgaagaaacaagagttacg
tctgtaaggaacaaaagtcctatgactctccacaagagacgcctttcaaggtttgaattt
gaagtcccgtcatcaccttcagtaacaggttcggttcttagccaaccaagaagacgacac
cacagcaagtcgccctataggccacgcatagcgcaggatgatggtaataacgatgatgat
tctttgtcatatataacaggtttgaattcacgtagaaatacaagtcctttgccaagacct
gactttggaagaacagtgtctccttataaccgaactcatgaacaaagaacaccttcgaat
gaaaacagaaaagcaagttcgggatttctggaagtggatagagtgagtacaaaaccaaac
tacaggagagcagtgactgctccaagattgagggaccaagaacaaacattgcaaaacacg
agaatgttgaaacaaagggaaaaatctcctttcaaaacaggtccagttagagaaagagaa
atcaatgaaatgatagcagaagtgaagctatcaaaaaatcctactgatgattattcatca
gcactagaaagtacagactcaattcaaacaggtgatcttttcttttctcgtgaatgcaat
gctttgcaagcgaagaattctgcattgcctaaaaaagttcaacaatacgggtattttagc
ccaagaccagtgattaccgacataaatcccattagcaacccctctgaagttaggagtaac
ctcaatatgaatatgccaagaaattcatccaatgtgttgttgtctcgaacaacgagggtc
acatcaatcagaaagggaagtggaactgggaagactcataccaatcctagtgtaaaaagt
gatgctagtgcaaaaacaactgacagcatgaggaaattcacatccaacagaaaaaagaac
cagaaagatgcatggtttgcttgtatgatgagaacaggaaactgtaagatttcaagaaaa
tcacctgaacgtaagccaattgacgaagcttcgttgattgagagagcaataattgtggaa
agcattccacaattctgggcagataaacatcaaccagcttcactaaatggcttcatttgc
aacaaacaagaagctcaacttctcaaggaactagtatcatcacagggctcttgtcctcac
attttacttaaaggaccctctagttctgagaaaggagaactagcaatggctcttcttcga
gaaatatatggtgatgcatgttctaatgacaaaaggactatgaaagtatcggttccaatc
acgtccagctctcatcacatggagctcaatgtaaattcagaaccaaatgccaaatatgct
ttgatgggattaatcaaagaaattagcaatatatatgcaattacccctgaagtaagcaat
gcgaatttcaaatcagattataaagtaataattctttacgaggtcgacaaagctgtagag
aacatccaacacttgatcaaatggatcatagaccgttattcagatatatgcaaattagtt
ctctgctgtgaagatgatgaaaacataattgcacctgtgaaaacccggttcaaagttatc
aatgttgatgctcctcaaactcatgaaattattgaggctcttactcagatagcaaataaa
gaggaaattgatctatccatgaattttgctatgaagattgctacaaaatctaagcagaac
ctcagggaagcaatcttggctcttgaaacatgcagagcacacaactatccattttcagaa
gaacaaccaattcctgttggatgggagaagattgtaatagaagtttctgtagagatccta
actgatccatcattttcacgcttactctcaatacgagggaaatttcaaatgcttctcctg
gattttgtccaccccagattgatcctcctgaaacttgtggagcagctcctaagaaaaact
gacgctggcttaaaaagggagctctactactggcatgcttattatgtgagtaatgacttc
tcctcctataatttgtcttaa
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