Trifolium pratense (red clover): 123910423
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Entry
123910423 CDS
T08949
Name
(RefSeq) partner of Y14 and mago-like
KO
K14294
partner of Y14 and mago
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123910423
03015 mRNA surveillance pathway
123910423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123910423
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123910423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
DUF4718
Motif
Other DBs
NCBI-GeneID:
123910423
NCBI-ProteinID:
XP_045817477
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Position
LG2:complement(31578255..31581107)
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AA seq
225 aa
AA seq
DB search
MSERERERVMSSSDRGEDQVKKQNQQQQQGERILAPTRRPDGTYRKQVRIRAGYTPQDEV
AIYQPKPALMRKEMASHIGPPGYDPQLDSKPKTKAVKRNERKKEKKRLQANESNLEPTVV
EDSSIKQEAVVSLTSQINELAVSGDTSIVTPTTNSVEASEPIGSAQDLDKRIRALKKKIR
LTEALQEKTAEQDLKPEQLEKLAKLEDWRKELKQLEDNKAEISAA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagagaaagagaaagagtgatgtcgagcagtgacagaggcgaagatcaagtg
aagaagcagaatcagcaacagcagcaaggtgaacggattctcgccccgacccgtcgaccc
gatggaacataccgaaaacaagttcgcatcagagccggttatacccctcaagatgaagtc
gctatttatcaacctaaacctgccctaatgagaaaggaaatggcttcacacattggtcct
ccaggttatgaccctcaattggattctaaaccaaaaaccaaagcagttaagaggaatgaa
agaaagaaggaaaagaaacgccttcaggcaaatgaaagtaacttagaaccaactgtagtt
gaagatagtagtattaagcaagaagctgtcgtttcattaacttctcagatcaatgaacta
gctgtttctggagatacctcaattgttactcctaccaccaattctgtagaagcttcagag
ccaattggctcggctcaagatttggacaaaagaatacgagcactgaaaaagaagattcga
cttacggaagcactacaggagaaaaccgcagagcaagatttaaagccggagcagttagag
aagctagcaaaactggaagattggcgtaaggagctaaaacaattggaggataataaggct
gaaatatcggcagcgtga
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