Trifolium pratense (red clover): 123910489
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Entry
123910489 CDS
T08949
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123910489
Enzymes [BR:
tpra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
123910489
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123910489
Prokaryotic type
123910489
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
123910489
NCBI-ProteinID:
XP_045817559
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All DBs
Position
LG2:32027956..32030987
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AA seq
367 aa
AA seq
DB search
MTHQNPSTKHTVEFEESSDNNNRPSKISKIEYDGEEEEMKNQERKIQRYLMAIEYIGTRF
FGSQKQLTDRTVVGVLEEAFCKFVGQPVSIICSSRTDAGVHALSNVCHVDIERISKRKPG
QVLQPHEPAVVRRAVNHFLQKQHGDLMVIDVRCVPSDFHARYKAQERTYFYRLLSGPEPL
STLEKDRAWHVQEDLNLPAMQEACRVLVGHHDFSSFRATGCQAKSPIRSLDELSVVEVIQ
SPYFPSLMDRERQMKVTDDLHDCHSNSEAVIPLSSSARINEVQTTNEDVEFGKRRFHRCL
VVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKV
KYDLPSS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcagaatccgtcgacgaagcatacagttgaatttgaagaatccagtgataat
aataataggccgtcaaagatttcaaaaattgaatacgacggtgaagaagaagagatgaag
aaccaagagcgtaagatccaacggtatttgatggcaattgaatacattgggactcgtttc
tttggttctcagaagcagcttactgaccgtactgttgttggtgttcttgaggaagctttt
tgtaaatttgttggtcagccagtctctattatttgttcaagtcgaactgatgctggagtg
catgctttatcaaatgtttgtcatgtagatatcgaacgaatcagcaaaaggaagcccggt
caagtgttacaacctcatgaacctgctgtcgttagaagggcagtcaaccatttcttacag
aagcaacacggtgacttaatggtcattgatgttcgttgtgttccatcagattttcatgcc
agatataaagcacaagaacgcacatacttctatcgcctgttgtctgggccagagcctttg
tcaaccttggagaaagatcgagcatggcatgtacaggaggatcttaatcttccagcaatg
caagaagcatgcagagttctagttggacatcatgattttagttccttcagggcaactggt
tgtcaggcaaaatcaccaattaggtctttagatgaactcagcgtcgttgaagtaattcaa
agtccatattttccatctttaatggatagagaacgacaaatgaaagtcactgatgatctc
catgactgtcacagcaactctgaagctgtcattcctcttagctctagtgcaagaatcaat
gaagtacaaacaacaaatgaagatgtggaatttggtaaaagaaggtttcatcgttgtttg
gtggtaacagcacgtgcacgtgcttttctttaccatcaggttagactacttgttggcgtt
ctcaaagctgtcggtactggaaacttaacagttccggatgttgaaagaattttgaatgca
aagaatgttgcagcagcaagtccaatggctccggcatgcggtctctacctgggaaaggtg
aagtacgatctgcctagttcgtag
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integrated database retrieval system
