Trifolium pratense (red clover): 123910515
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Entry
123910515 CDS
T08949
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123910515
03036 Chromosome and associated proteins [BR:
tpra03036
]
123910515
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123910515
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
123910515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
UTP6_C
HAT_Syf1_M
xRRM
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
123910515
NCBI-ProteinID:
XP_045817602
LinkDB
All DBs
Position
LG2:complement(32198192..32212723)
Genome browser
AA seq
828 aa
AA seq
DB search
MEEQTLTLTSEAEREREPEKDEAMSDSDDSDSEDEAQEKIQMESLQTELAANPSNYDAHL
QYINILRKTGDIDRLTKAREAMSEIFPLSPPTWQQWIKDELSLNTASRPEAFSRVLKLYE
RGVFDYLSVSLWCDYLDFVQEFDPMVHQCSPTGISKSRDIFETALTAAGLHVAQGSKIWE
AYRQYEQAVLLTIDESDAQAKEKQVQHIRSLFHRQLSIPLADMNSTLIAYKTWEVEQGNF
NDASIDLIDCYPHVASAYQKAVEMYNARIHLEEQISIQHISDSERLQQYMNYLKFEQSTG
TPARIQVLYERAITDFPLSPDLWLDYTRYLDKTLKVGKIVSNVYSRATKNCPWVGELWVR
YMLSLERGHASEKDLAEIFEKSLQYTFSTVDEYLELFLTRVDGLRRRMTFTKGENPLEYK
IIRETFQRASDYLSPYMKNTNGLLHIHAYWAHLETKLGNDITAARGVWENFLKTCGSMLE
AWTGYITMEVELGHINEARSIYKRCYSKRFSGTGSEDICNSWLRFEREFGKLEDFDHALQ
KVTPRLDELRVFRLQQESKSVEEMENSNPRSNVGDKRKVRSDIADEQSPAKRKKDASGKL
KKPPKDNTYQVQNSSQLTKVEGTNQKNNKSDDNRSEQQLTRGKHRAYSDQCTAFISNLHP
TANDEHIRDFFSDIGGIVAIRILHDKFTGKSRGLAYVDFLDDEHLVAAVAKNKNTLLGKK
LSIARSDPKRGGKETLDPKNAEHAHANNHSDKKGLVSKETDDTFMRDAQDGKFSSRKPGS
GNMQFKGKNTFAVPRNVRPLGYTANKPKAEEGGETPKSNEEFRKMFIG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagacactaaccctaacttcagaagcagagcgagaacgagagccggagaaa
gacgaagccatgtctgattctgacgattcggattcggaggacgaagctcaggagaaaatc
caaatggaatctctccagaccgagcttgccgctaacccctccaactacgatgctcatttg
caatatattaatattttgaggaaaacgggtgatattgatagactgacaaaagcaagggaa
gctatgagtgaaatatttccattgagccctccaacatggcaacagtggatcaaagatgag
ctttctctcaacaccgcttctagaccggaggctttctctagagttcttaagctttatgaa
cgtggcgtgtttgattatctgtctgtctctctatggtgtgactaccttgattttgtccaa
gagtttgatccaatggtacaccaatgttcacccactggtatttccaagtcaagggatatc
tttgaaactgcccttactgctgctggtttgcatgttgctcaaggcagtaagatatgggaa
gcatataggcaatatgagcaggctgtacttctaaccattgatgaatctgatgcacaggca
aaagaaaaacaagttcaacacattcgaagtttattccatcgccagttgtctatccccctt
gctgacatgaattcaacacttattgcctacaagacttgggaggtggaacaaggaaatttt
aatgatgcatccattgatcttattgattgttatcctcacgtggcatcagcataccagaag
gccgtagagatgtataatgctcgcattcatcttgaagaacagatttctatccaacatatt
tctgattcagaaagactacaacagtacatgaactatttgaaatttgagcagtctactgga
acaccagctagaattcaagttctatacgagcgagctattaccgactttcctttatcacct
gatctctggcttgattatactcgctatttggacaaaactttgaaggttggtaaaattgtc
agcaatgtatattctagggccactaagaactgcccttgggtcggagaactttgggttcgg
tatatgctttctttggagcgcggtcatgcttctgagaaagacttggctgagatctttgag
aagtccctgcaatacaccttctctactgtggatgagtatcttgaattgtttctcacccgg
gtagatggcttaaggcgaagaatgacattcaccaaaggagagaatccattggaatataaa
ataataagggagaccttccagcgtgcatcagattacttgtcaccatacatgaagaataca
aatggtttgttacatatacatgcttattgggcccatttagaaacaaaactcggaaacgat
ataactgcagcccgtggagtttgggagaattttctcaagacctgcggttcaatgttggag
gcatggactggttatataaccatggaagttgaattgggtcacataaatgaagcaaggtcc
atatacaagagatgctatagtaaaaggttttctgggactggttcagaggacatttgcaac
tcatggttacgctttgagagggagtttggcaagttggaagattttgatcatgctttacaa
aaggttaccccacgtctggatgagctacgtgtttttaggttgcagcaggaatcaaagtca
gtagaggaaatggaaaatagtaatccaaggagtaatgtaggtgacaaaagaaaggtgagg
tcagatatagctgatgaacaatctccagcaaagcgaaagaaagatgctagtggaaaatta
aaaaaaccacccaaggataatacatatcaagtgcagaactcttctcagttgacaaaagtg
gaagggaccaatcagaaaaataacaaatctgacgacaaccgaagtgagcagcagcttacc
cgtggaaaacaccgggcatactctgaccagtgcactgcttttatatcaaatcttcaccct
acggcaaacgatgagcatattcgtgatttcttcagtgatattggtggaattgttgccatc
cgcatcctacatgacaagttcaccgggaagtccaggggactagcttatgtggactttttg
gatgatgagcaccttgttgcagcagtagctaagaacaagaataccttacttgggaaaaag
ctaagtattgctcgatctgacccaaagcgaggtggcaaggaaactcttgatccaaaaaac
gcagaacatgcacatgccaataatcattctgataaaaaaggtttggtatcaaaagaaacc
gatgatactttcatgagagatgcacaagatgggaaattctcttctagaaagccaggaagt
ggcaacatgcaatttaaagggaagaatacgtttgccgtgcctagaaatgtcagaccactt
ggttatactgcaaataaaccaaaagcagaagagggtggtgaaacgccaaaatctaatgaa
gaattcagaaagatgttcattggataa
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