Trifolium pratense (red clover): 123910534
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Entry
123910534 CDS
T08949
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123910534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123910534
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
123910534
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123910534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT
HEAT_EF3_N
HEAT_2
TOR1L1_N
HEAT_ECM29
Cnd1
HEAT_DAAF5
mTOR_dom
GNC1_N
Htt_N-HEAT_1
PPP2R1A-like_HEAT
Dopey_N
MMS19_N
TTI1
Motif
Other DBs
NCBI-GeneID:
123910534
NCBI-ProteinID:
XP_045817633
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Position
LG2:complement(32384247..32396196)
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AA seq
1218 aa
AA seq
DB search
MANLALPGILEKMTGKDKDYRYMATSDLLNELTKPTFRADPDLELKLKNIIIQQLDDAAG
DVSGLAVKCLAPLVRKMNEARVVEMSSQLCDKILNGKDQHRDTASIALKTVVAEVSTQSL
AQSILSILSPQLIKGITGKDMSTEIKCECLDILCDVLHKFGNLMAADHELLLSSLLSQLN
SNQATVRKKTVACLASLSSSLSDDLLAKATVEVVTKLKNKATKSDMTRTNIQMIGAISRA
VGYRFGPHLGDTVPVLINYCTTASENDEELREYSLQALESFLLRCPRDISVYCDEILHLA
LAYLSYDPNFTDNMEEDTDDEGHEEEEDDESANEYTDDEDASWKVRRAAAKCLAALIVSR
PELLSKLYDEACPKLIDRFKEREENVKMDVFNTFIELLRQTGNVTKGQTDANETSPKWLL
KQELSKIVKSINRQLREKSIKTKVGAFSVLKELVVVLPNCLADHIGSLIPGIEKALNDKS
STSNLKIEALIFTRLVLSSHSPDVFHPYIKALSAPVLSAVGDRYYKVTAEALRVCGELVS
VVRPSIQGSGFDFRPYVHPIYNGIMSRLINQDQDQEVKECAISCMGLIVSTFGDHLNAEL
PACLPVLVDRMGNEITRLTAVKAFAVIATSPLRVDLSCVLEHVVAELTAFLRKANRALRQ
ATLGTLNSLIVAYGDKIGLSAYEVIIVELSGLISDSDLHMTALALELCCTLMGDERSSQS
VALAVRNKVLPQALRLIRSSLLQGQALLALQNFFAALVYSANTGFDSLLESLLACAKPSP
QSGGIAKQALHSIAQCVAVLCLAAGDQKCTSTVKMLTDILKDDSSPNSAKQHLGLLCLGE
IGRRKDLSIHAHIENVVIESFQSPFEEIKSAASYALGNIAVGNLPKYLPFILNQIDNQQK
KQYLLLHSLKEVIVRQSVDKAEFQESSVEKILNLLFNHCESEEEGVRNVVAECLGKIALI
EPLKLVPALKVRTSSAAAFTRATVVIAVKYSIVERPEKIDEIIYPEISSFLMLIKDNDRH
VRRAAVLALSTFAHNKPNLIKGLLPDLLPLLYDQTIVKQELIRTVDLGPFKHTVDDGLEL
RKAAFECVDTLLDSCLDQLNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLA
VLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNRISGGDCSAKFKSLMN
EISKTQALWDKYYSIRNE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttagctttgcctggtatacttgaaaagatgactgggaaggataaagactac
agatatatggccacttctgatttgcttaatgagttgaccaaacccacttttagggccgat
cctgatctcgaacttaaattgaaaaatatcatcatacaacaacttgatgatgctgctggt
gatgtttctggacttgctgtcaaatgccttgctccattagtgaggaagatgaatgaggca
agggttgtcgaaatgagcagtcaactgtgtgacaaaatactaaatgggaaggatcaacat
cgggacactgctagcattgctttgaagacagttgttgctgaagtttctacccaatccctt
gcgcaatctattctttctattctctcgccacagctgataaaaggaattacgggcaaagat
atgagcactgagattaaatgtgaatgtctggatattttatgtgatgtccttcataaattt
gggaatctgatggcagctgatcatgagctattgttaagttccctgctctcgcagttgaat
tctaatcaagctactgtgcgtaagaagactgttgcatgccttgcatctctttcttcaagt
ttgtcagatgatttgttggcaaaggcaacagttgaagttgttaccaagttaaagaataaa
gctaccaagtctgatatgacccgtacaaatatacaaatgattggtgctataagtcgagca
gttggctaccgatttgggccccatcttggcgacacagttcctgtcctaatcaactattgt
accactgcttcagaaaatgatgaagagcttcgtgagtacagtttgcaggctctagaaagc
tttcttctaaggtgtccaagggacatttctgtgtattgtgatgaaattcttcatctggca
ctagcatatctgagttatgacccaaactttactgacaacatggaggaggatactgatgat
gaaggtcatgaagaggaggaggatgacgagagtgcaaatgaatatacagatgatgaagat
gccagctggaaagttcgcagagcagcagctaaatgcttagctgcattgatcgtttctcgt
cccgagttgctttcaaagctgtatgatgaggcttgtccaaaactgattgacagatttaaa
gagagagaagaaaatgtcaagatggatgtatttaatacgttcattgagctcttgcgtcaa
actggaaatgtcacaaaagggcagactgatgcaaatgaaacgagtcctaaatggttgttg
aagcaagaactgtcaaagattgtcaagtctatcaataggcagttgcgtgagaaatccatc
aaaactaaggttggtgccttttctgttttgaaggaactcgtggttgtcttgcccaactgt
cttgcagaccacattgggtcactcattcctggaattgaaaaggcattaaatgacaaatca
tcaacctcaaatttgaagattgaagccctgatatttacaagattggtattatcttcgcat
tctcctgatgtattccacccttatataaaggctctttctgctcctgtgctatcagctgtt
ggtgaccgatattacaaggtcacagcagaggccttgagggtgtgtggagaacttgttagt
gttgtgcggcctagcattcaggggtctggttttgatttcagaccatatgtccatcccata
tataatggcattatgtcacgcttaataaaccaagatcaggatcaggaggttaaggaatgt
gctatctcctgcatgggcctcatcgtgtcaacatttggcgaccatctaaatgcggagtta
cctgcatgccttcctgtgcttgttgataggatggggaacgagataacccgacttacagct
gtcaaggcattcgctgttattgctacttctccacttcgggtagatctatcatgtgtcctg
gagcatgtagtggcagagttgactgcgttcctacggaaagctaaccgtgcactaaggcag
gccaccttgggaaccttgaattcactcatagttgcttatggtgataagattggtttatct
gcatatgaagttattattgtagaactgtcaggactaattagtgattctgacttgcatatg
acggctcttgccttggaactatgctgcacactaatgggtgacgagagatcaagtcaaagt
gttgcattggctgttagaaacaaagttcttccccaagctctaagattaattagaagctca
ttgcttcaggggcaagcacttttggctttacaaaacttttttgccgctttagtatattct
gcaaacactggttttgattcgctgctggagtcgctgcttgcatgtgccaagccttctcca
cagtcaggtggcattgctaaacaagcattgcattcaattgctcaatgtgtggctgttcta
tgccttgctgccggtgatcagaagtgcacgtctactgtgaaaatgcttactgacattctc
aaggatgacagcagccccaactcagctaagcagcaccttgggcttctatgtttgggcgag
attggtagaaggaaggatctaagcatacatgcacatatagaaaatgttgtaattgagtct
ttccaatctccttttgaagaaataaagtctgcagcctcgtacgcccttggtaacattgcc
gtgggtaatcttcccaagtacttgccatttatcttgaatcagattgataatcagcagaag
aaacaatatcttctgcttcattctttaaaagaggtaattgtgaggcagtctgtagataaa
gcagagttccaagagtctagtgtcgagaaaatacttaatttgctctttaaccactgtgaa
agtgaggaagagggggtgcgcaatgtcgtggctgagtgtcttggaaaaattgcgcttatt
gaacctttaaaacttgttcccgcactcaaggtaagaacaagcagtgcagctgcatttacg
cgagctaccgttgtcatagctgtgaagtactctatagttgaacgtccagagaagatagat
gagatcatataccctgaaatatcatcatttctgatgcttatcaaggataatgacaggcat
gttaggcgagctgctgtcttggcactgagcacatttgcacacaataaaccaaacctcatc
aaggggcttcttcctgatctgttgcctcttctttatgatcaaacaattgttaagcaagaa
ctgataaggacggttgatcttggccctttcaagcatactgtggatgatgggcttgaattg
aggaaggcggcttttgaatgtgtagacacattgctggatagttgtcttgatcaactgaac
ccctcatcatttattgttccgtatcttaaatctggtttggatgatcattatgatgttaaa
atgccttgtcacctgattctttcaaaactagctgacaagtgtccttctgcagtcttggca
gtgttggattcattggtggatcctctccagaagactatcaactttaagccaaagcaagat
gcagtcaagcaagaggtagatcgaaatgaagacatgatacgaagtgcactccgagctatt
gcttccttgaaccgcataagcggaggagattgcagtgccaagtttaagagtctcatgaat
gaaatatcaaaaacacaagctctctgggataagtattattctatccgcaatgaatga
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