KEGG   Trifolium pratense (red clover): 123910679
Entry
123910679         CDS       T08949                                 
Name
(RefSeq) pinin-like isoform X1
  KO
K13114  pinin
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
tpra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123910679
   03015 mRNA surveillance pathway
    123910679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123910679
   03041 Spliceosome [BR:tpra03041]
    123910679
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123910679
Spliceosome [BR:tpra03041]
 Complex C
  Other components
   EJC/TREX
    123910679
SSDB
Motif
Pfam: Pinin_SDK_memA Patatin
Other DBs
NCBI-GeneID: 123910679
NCBI-ProteinID: XP_045817818
LinkDB
Position
LG2:complement(33704825..33709552)
AA seq 430 aa
MASTVAAAEKTEQELRNEIDELLRQQREINERLRDPRGLRKGALSAPINRNNSIRQRPFI
RPGGDNHDSEDQPPAKRRLSSAVVKVGDGELPEDADAGNIKDSTSEGVNGNSTFAQSDGN
HFNSHQSGMSRRDGYQRNSKVVNASEVPTTEHVPRVLPKNQDPSLVNRNKRMLGQLLGTL
EKFRKEDKQLSGTEAFMRRSNSLQRAEQKAREESERLRKEEREQIAEKRRRDLTLRARVA
AKTEEKKLELLFLRWSEHHKRLSNFIRTKAEPPIYYLPKKPLDEDAASIEKRKEEDFLEW
KNARREELSEYQKQIGDQYLANVEKDLERWQNARNARKVNNDHNLQETMDKELDTHRLEH
GPKKRKIPDGNNNEDDEEDDDVEDINVAEDDMIDDELDDDSGRRIDETIKMEMSNTTADP
AADADNIDLN
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcgagtacggtggcggcggcggagaaaaccgaacaagaactccgtaacgagatcgat
gagcttcttcgtcaacaacgcgagataaatgagaggcttcgagatcctcgtggccttcgc
aaaggtgctttatcggctcctattaaccgcaataattctattcgccaacgtccttttatt
cgtcctggaggagataatcatgattctgaagatcaacctcctgctaaacgtcgactttca
tctgctgttgttaaggttggtgatggggagttgcctgaagatgctgatgctggaaacata
aaggattcaactagcgaaggtgtaaatgggaactctacctttgctcagagtgatgggaac
cattttaattctcaccaaagtggaatgtctagaagagacggctatcaaagaaattcgaag
gtggtaaatgcttccgaggttcccactacagaacatgttccaagggtattgcccaagaac
caggatccaagcttggttaatagaaacaaaagaatgctgggtcagcttttgggaactctg
gagaaattcagaaaggaagataagcaactctcaggaacagaggcattcatgcgaagatcc
aattctttgcagagagctgagcaaaaagcacgggaagaaagtgaaaggctcaggaaagaa
gaacgtgaacagattgctgaaaaacggaggagggatttgactcttagagcacgtgtggct
gctaagacagaagaaaagaaattggagttactgtttcttcggtggagtgagcatcataaa
agactaagcaattttataaggactaaagcagaaccgccaatctactatttgcctaaaaag
cccttggatgaagatgctgcgtcaattgagaagcgcaaagaggaggatttccttgaatgg
aagaatgcaagaagagaggaattgtctgagtatcaaaagcaaatcggggaccaatatctt
gctaatgttgaaaaggatttggagagatggcagaatgcaaggaatgcaagaaaagtaaac
aacgaccataatttacaagaaactatggacaaagaattggatactcataggctcgagcat
ggtcccaagaaaaggaaaatccctgatggaaacaataacgaagatgatgaggaagatgat
gatgtggaagatataaatgttgcagaggatgatatgatagatgatgaattagatgatgat
tctggtaggaggattgatgaaacaattaagatggaaatgagcaataccactgcagatcct
gctgctgatgctgataatatagacctaaactga

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