Trifolium pratense (red clover): 123910713
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Entry
123910713 CDS
T08949
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123910713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123910713
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123910713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
TIP49
AAA_14
AAA_28
AAA_17
RNA_helicase
AAA_33
NPHP3_N
IstB_IS21
AAA_18
nSTAND3
Rad17
Mg_chelatase
ATPase_2
Cytidylate_kin2
AAA_3
Viral_helicase1
NB-ARC
tRNA_lig_kinase
TsaE
Nucleolin_bd
NACHT
ABC_tran
Parvo_NS1
Bac_DnaA
AAA_11
AAA_7
ExoD
Motif
Other DBs
NCBI-GeneID:
123910713
NCBI-ProteinID:
XP_045817859
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All DBs
Position
LG2:complement(33915637..33920921)
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AA seq
828 aa
AA seq
DB search
MRLKKQKNMGRRNNGGGGGGGGGGGRSLQFALRRRVESCKSKYTTPEEIVDHLRSNYPDY
HRTKGQQLLRFVNDALQFSNNTPSRKPNQKSNAAADEDDDDDDEEEYRNSSRKRRKDIIT
DECEARLQKIESLHIKSRMSKQIPSSSSEPASNNSEDGEDGAVSTSEDAIYSEKVEPAFD
LMKDMLRNSYTGAKTVPVVVAEEKNVELDMGNSSKATITVNRNGGEPPKLYRTTKIRLKG
LGTGSNVAGGGGVGVVEMKGKEGPMFKDLGGMKDILEELMMDIVSLCNPQLPRHLGVKPV
TGILLHGPPGCGKTRLAHAIANETGLPFHHISATEVVSGVSGASEEYIRELFDKAKRTAP
SIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDEPESSDEPRGYVLVIGATNRPDSLD
PALRRPGRFDREFLVGVPDESSREEILSVLTRNLKLDGSFDLRKIARSTPGFVGADLAAL
ANKAGNLAMKRIIDERKRELSQDLMSENTKGWWREPWLPEEINKLAIKMSDFEEAAKMVQ
PSARREGFSSIPNVKWEDVGGLDILRHEFDRYIVRRIKYPEYYEGIGMNLESGFLLYGPP
GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFNRARTCAPCVLFFDEVD
ALTTERGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDRALLRPGRFGKLL
YVPLPSPDDRVLILKALARNKHIDSSVDLSAIGRMEACENLSGADLAELMNEAVMAALDE
KLASIETTCESLTIRTSHFEVALSKVSPSVSDKQRQYYERLSRSLKAA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaagaagcagaagaatatggggagaagaaacaacggcggtggtggtggtggc
ggcggaggaggaggaaggtctctgcaatttgctcttcgccgacgagttgaatcatgcaaa
tcaaagtacacaacccccgaagaaatcgtcgatcatcttcgctccaattaccctgattac
caccgaactaagggccaacaactccttcgatttgttaacgatgctcttcaattctccaat
aatactccctcacggaaacctaaccagaaaagcaatgccgccgccgacgaagatgacgac
gatgatgatgaagaagagtatcgaaattcttctcgaaagagacgtaaggatattattacc
gatgaatgtgaagctcgattgcagaaaattgaatctcttcatatcaaatcaaggatgagt
aagcagattccatcatcttcctccgaacctgcttccaataacagtgaagatggtgaggac
ggtgcagtttcgacttcagaggacgcgatttatagtgagaaagttgaacctgcttttgat
ttgatgaaagacatgctgcgaaattcatatacaggggcgaaaacggtacctgtggtggtg
gcggaggaaaagaatgtcgaattggatatggggaattcaagtaaagctactattactgtt
aataggaatggcggtgaaccaccgaagttgtatcggactacaaagatacgattgaagggt
ttgggtacgggttctaatgttgccggtggtggcggtgttggtgttgttgagatgaaaggg
aaggagggtccaatgtttaaggatttgggtgggatgaaagatatattggaagaattgatg
atggatattgtgtcattgtgcaatcctcaattgcctagacatttgggagtgaaaccggtg
actggaattttgttacatggaccacctggttgtggaaagactagacttgctcatgctata
gcgaatgaaaccggtcttccttttcatcatatttcggctacggaggttgtttctggagtc
tcaggtgcatccgaagaatatattagggagctttttgataaagcaaaaaggactgctccg
tcaattgtctttattgatgagattgatgcaattgcttcgaaaagagagaatttacagcgt
gaaatggagaaacgaattgtgacccagttaatgacttccatggatgagccggagagttct
gatgaacctcgtggctatgttcttgtaattggagccacaaataggcctgattctcttgac
cctgctcttagacggcctggtaggtttgatcgtgagtttttggttggcgttcctgacgaa
tcttccagggaggagatcctttccgtgcttactcgcaatcttaaacttgatggttcattt
gatctgcgcaaaatagccaggtctacgccaggatttgttggtgctgatttggcagctctg
gctaacaaagctggtaatctggcaatgaagaggataattgatgaaaggaaacgtgaatta
tctcaagatctcatgagcgagaatacaaaaggctggtggagagaaccttggttgcctgaa
gaaataaataagcttgctatcaagatgtctgattttgaggaagcagccaaaatggtgcaa
ccttcagcaagaagagaagggttctcttccattcctaatgtcaaatgggaagatgttggt
gggcttgatattttaaggcatgagtttgatcgctacattgtaaggcgtataaaatatcct
gagtattatgagggaattgggatgaatcttgaatctggattcttgctttatggacctccg
ggttgtggtaaaacactgattgccaaggctgttgccaatgaggctggagctaatttcatt
catatcaagggacctgagcttctaaataaatatgttggggaaagtgagcttgcagtgcgg
acattgtttaatcgtgcaaggacttgtgcaccatgtgtactattttttgatgaggttgat
gctctgactactgaacgcggtaaagaaggtggatgggttattgaaagactattgaaccag
ttgcttatcgagttagatggcgctgagcagcggagaggcgtttttgtgattggtgcaaca
aataggcctgaggtgatggaccgcgctctcttacggcctggcaggtttggtaaactgctt
tatgttcctcttccaagtccagacgaccgtgttttgattttgaaagctcttgcaagaaat
aaacatattgattctagtgtggatttgagtgccattggaagaatggaagcatgtgaaaac
cttagtggtgctgatcttgcagaattgatgaacgaagcagtaatggctgctcttgatgag
aagttggcctcaattgagacaacttgtgaatcattgaccattaggacaagtcattttgaa
gtagcactaagtaaagtttctccatccgtgtcggacaagcaaaggcagtactatgagcgt
ttgtcaagaagccttaaagcggcatga
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