Trifolium pratense (red clover): 123910788
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Entry
123910788 CDS
T08949
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic-like isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tpra03012
]
123910788
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123910788
Translation factors [BR:
tpra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123910788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
Helicase_C
HA2_C
HA2_N
DSRM_DHX29
nSTAND3
DND1_DSRM
AAA_22
AAA_19
DUF421
ATPase
dsrm
Motif
Other DBs
NCBI-GeneID:
123910788
NCBI-ProteinID:
XP_045817979
LinkDB
All DBs
Position
LG2:complement(34514354..34547702)
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AA seq
1450 aa
AA seq
DB search
MPPKRNQKQSRKPQSSSSSSAPKLQISAENENRIRRLLLNSARPTPATDDTLTKDQKAKK
LKTVYEKLSCEGFTDHHIELALSALKECATFESALDWLCLNLPGNELPLKFSSGSSFHYT
EGGSVGVILNQQDNSTPSVDPSITTKDQALESPVLIKRQLNDDTLDSCQSSQADWIRQYV
EQQEEDDENKTWEDDIFDESSATKLREPRPYDVIAKEYLAARLEATKAKEKGDKKHQELA
SRIIRKLKQELSALGLSDDTLALEYDQISTKHASEGASMGHEPLIENEPSDVESNSAVIL
PSNVAAINGSDVENHSADENLAKSCLPAVHVEKDSAQGVAGDIELGGFFLEDMPSNEIHP
DILKAQKLEKIKRLSEKNLDKLDGIWKKGDPQKVPKAILHQLCQKSGWDAPKFNKILGRG
KSFSYTVSILRKASGRGKNRKAGGLVTLKLPDQNEAFESAEDAQNKVAAYALFQLFPDFP
IHLLITEPYASVVMKWMEGESLTKLEDSVEDHKSRFVESILSGDGSGETASADVIDYKFP
QNNGRIDENKSSTIDSHQSFAQKLYFAGGTYSKELESTNLRQAQYIKMGTQRYQDMLKFR
ATLPIATLKGDILQILKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGGHCNIICTQP
RRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLMGNR
SLTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSSESSSKVKVILMSATVDSSLFSRYF
GHCPVVTAEGRTHPVTTYFLEDIYDQINYRLASDSPASLTYETFPEGQNLQRAHVTNNRG
KKNLVLSAWGDESVLSEELFNPYFDLSYYQSYSEQAQKNLKRVNEDVIDYDLIEDLICYI
DESCGEGSILVFLPGVFEINHLHDKLAASYQFGGPSSDWIIPLHSSVASTEQKKVFLRPP
GNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLSSMVEDWISQANARQRQG
RAGRVKPGICFRLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGYIKPFLSMALE
PPKIEAMDSAMSLLYEVGALEGDEELTPLGYHLAKLPVDVLIGKMMVYGAIFGCLSPILS
VSAFLSYKSPFVYPKDERQNVERAKLTLLNDKQHGPGDGNDIDRQSDHLLMMIAYKRWET
IFNEKGPKAAQQFCGSYFLSSSVMFMIREMRIQFGTLLADIGLITLPKFNQMDGKKIGIL
DRWLSDASQPFNMHAHHSSILKAILCAGLYPNVAAGEQGIVAAALSSLKRSPSSANSSRT
VWFDGRREVHLHPSSINSNTNVFKYPFLVFLEKVETNKVFLRDTSVISPYSILLFGGSIN
VQHQTGLVIIDGWLKLNAPAQIAVLFKELRLTLHSILKELIRKPENVIVLNDEIIKSIIN
LLLEEGSVPK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaaaaggaatcagaaacagagccgaaagcctcagtcctcatcctcctcctcc
gctccgaagctacaaatttcggcagaaaatgagaaccgcatccgccggctattgctcaac
tctgcccgccctacccctgcgacggacgataccctaacaaaggatcagaaagcgaagaag
ctgaaaactgtttacgagaaactctcttgcgaaggattcactgatcaccacattgagctt
gctctctccgctctcaaggaatgcgctacatttgaatcagctcttgattggttatgcttg
aatttacccgggaatgaacttccactcaagttttccagtgggtcttcctttcattatact
gaagggggttctgttggtgttatattaaaccaacaagacaattcaactccctcagtggat
ccatccatcacaactaaggaccaagctctagaatctccggttttaatcaagagacagtta
aacgatgatactttagattcttgccaatcatctcaagcagattggatcaggcaatatgtg
gagcagcaggaagaggatgatgaaaataagacttgggaagatgacatttttgatgaaagt
agtgccacaaagcttcgcgaacccaggccttatgatgttattgccaaggagtatcttgct
gcaaggttggaagctacaaaggcgaaggaaaaaggggacaaaaaacatcaggagctggca
agccgtatcatacgaaaactgaaacaggagctgtctgctctaggattatcagatgatact
ttggccttagaatacgaccaaatcagtactaaacatgcatctgagggagcttccatgggc
catgagcctttgatagaaaatgagccaagcgatgtagaaagtaattctgccgttattttg
ccatctaatgtggccgcaataaacggtagtgatgtggaaaatcatagcgcagatgaaaat
cttgccaagtcttgcttaccagctgtacatgttgaaaaagattctgcacaaggagtggct
ggagacattgagcttggtggtttcttcttggaggatatgccatctaatgaaatacaccct
gatattttgaaagcacagaaactagaaaaaattaaaagattatccgagaagaacttagat
aagttagatggcatttggaagaagggggaccctcaaaaggttccaaaggctatccttcat
cagctttgccagaaatcaggatgggatgctccaaaattcaataaaatacttggcagagga
aagagtttttcctatactgtaagcatattgcgtaaagctagtggcaggggcaagaatcga
aaagccggggggctggtcacacttaagcttccagatcagaatgaggcctttgaatctgct
gaggatgcacagaataaagtggctgcatatgctttgttccaactatttcctgatttccca
attcatctcctaattacggagccttatgcttcagttgttatgaagtggatggaaggggaa
tcattgaccaagctagaagacagtgtggaagatcataagtctcgttttgtggagtcaata
ttaagtggcgatggctctggtgaaactgcatctgctgatgttatagactataagtttcct
caaaacaacggtagaattgatgaaaataaaagttcaaccattgatagtcatcaatcattt
gctcagaaattatattttgcaggaggaacctacagtaaggaattggagagtactaatttg
agacaggcgcaatacattaaaatgggaacacaaagataccaggatatgttgaagtttaga
gctacacttcctattgccacactaaagggtgatatattgcaaattctaaaggaaaatgat
gttcttgttgtttgtggggaaacaggctctggaaaaacaactcaggttcctcaattcata
ttggatgagatgattgagtcaggacatggtggacactgtaatattatttgcacacaacca
aggagaatagcggctatttccgtagctgaaagggtagccgatgagcggtgcgaaccttca
ccaggttctgatggctccttgattggttatcaagttcgtctagatagtgccaggaacgaa
aaaacaaggcttctgttctgtacaacaggcatccttctgagaaaattaatggggaaccga
agcttgacgggcattactcatatcatagttgatgaagttcatgaaaggtctttattgggc
gattttattctaattgtgttaaagaatttaattgagaagcagtccagtgaaagctcttca
aaagtcaaggtcattctaatgtcagcaactgtggattcaagtttattttcaagatacttc
ggtcattgccctgtagttactgcagaaggcaggactcatccagtgacaacatactttctt
gaggatatatatgatcagattaattatcgacttgcttcagattcaccagcttctttaaca
tatgaaacatttcccgaaggacagaacttgcagagagctcatgtgacaaacaacaggggg
aagaagaatctagtcttatctgcatggggtgatgagtctgtgctttctgaagaacttttt
aatccatattttgatcttagttattatcagtcatacagtgaacaagcccaaaaaaatctg
aaaagagtaaatgaggatgtcatcgattacgatcttattgaagatctaatatgttacatt
gatgaaagttgtggtgagggttccatccttgtcttcttaccgggagtgtttgagataaac
cacttacatgataagttagcagcgtcgtaccaatttggtgggccatcttctgattggatt
attcctttgcattcgtcagttgcgtcaactgaacagaaaaaggtgtttttacgccctcca
ggaaatatacgcaaggttgttatagccacaaatatagcagagaccagcataacaatagat
gatgtgatatatgtaattgactgtggaaaacataaggagaatcgttataatccgcagaag
aaattgtctagcatggttgaagattggatttctcaagcaaatgcaaggcagcgtcagggt
agagctggacgtgtaaaacctggaatttgctttcgcttgtacacccgttatagatttgaa
aaactcatgcgtccttatcaggttccagagatgcttcggatgccattagttgaattgtgt
ctgcagattaagttactatctcttggatatatcaagccatttttgtctatggctttagaa
cctccaaaaattgaagcaatggattcggcaatgtctctattgtatgaggtcggtgctctt
gaaggggatgaagagctgacacctcttgggtatcatctggcgaaactacctgttgatgta
ttaattgggaagatgatggtgtacggtgcaatttttggttgcttgtcacctattctttca
gtttccgcatttttaagttacaagtctccatttgtgtatcccaaagatgagaggcagaat
gtcgaaagagcaaaactaacattgttgaatgataagcaacatgggcccggtgacgggaat
gatattgataggcaatcagatcatttgcttatgatgatagcatacaaaagatgggagact
atttttaatgagaaaggacctaaagctgcacagcaattctgcggttcatattttctgagc
agctctgtaatgtttatgataagggagatgaggatacagtttggaactttgctagcagac
attggtctcatcactcttccaaaatttaatcagatggatggaaaaaagatagggattctt
gacaggtggctttctgatgcatcacaaccatttaatatgcatgcacatcactcgtcaatt
ctgaaggctatactatgtgcaggtttataccccaatgtagcagctggtgaacaaggtatt
gttgcggcagctctcagcagccttaagcggtctcctagctctgcgaattccagccgtaca
gtctggtttgatggaagaagagaagttcatctccacccatcttctatcaacagtaacaca
aatgtattcaagtacccgtttcttgtcttccttgaaaaggttgaaacgaacaaagtattt
ctacgagatacttcagtcatttctccatactcaattttgctctttggagggtcaatcaat
gttcagcatcagactggactggtcatcatcgatggatggttaaaattgaatgcacccgcc
caaatagctgtgttgttcaaggagctacgattgactctacattccattctaaaggagctt
attaggaaaccggagaatgtgatcgttctaaatgatgagatcatcaagtctatcatcaat
ctgcttttagaagaaggcagtgtgcctaaatga
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integrated database retrieval system
