Trifolium pratense (red clover): 123910879
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Entry
123910879 CDS
T08949
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123910879
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123910879
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123910879
NCBI-ProteinID:
XP_045818119
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Position
LG2:1260416..1265036
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AA seq
405 aa
AA seq
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MTSLSWFLILFALSLLIPNFVSSSAVQDPKQVVQDVQRSIKNATRRNLGYLSCGTGNPID
DCWRCEPNWENNRQRLADCAIGFGKDAIGGKNGKIYIVTDSGDDDPVNPMPGTLRYGAIQ
DEPLWIIFKRDMVITLKQELLVNSYKTIDGRGASVHIANGGCITIHYVNNIIIHGINVHD
CVPTGNTNIRNSPEHSGFWTVSDGDGISVFNSNNIWIDHCSLSNCRDGLIDVIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSANPTINSQGNRFLAPDNRFSKEVTKHEDGSESEYNSWNWRSDGDLFLNGA
FFRQTGADASSIYARASSLSARPASLVGSITTTSGVLSCKKGNLC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacttccctttcatggttcctcattctttttgctctttctcttcttatcccaaatttt
gtttcatcctctgcagttcaagatcctaaacaagttgtacaagatgtacaaaggagcatc
aagaatgctactaggagaaacttgggctatttatcatgtggaacaggaaaccccattgat
gattgttggagatgtgaaccaaattgggaaaacaatagacaaagactagctgattgtgca
attggatttggcaaagatgcaattggtggtaaaaatggtaaaatctatatagtaactgat
tcaggtgatgatgatccagttaatcctatgccaggaacattaagatatggtgcaattcaa
gatgaaccattatggataattttcaaaagagatatggtaattacattaaaacaagagtta
ttggtaaattcatataaaacaattgatggaagaggtgctagtgttcacatagcaaatggg
gggtgtataacaatacattatgttaataacattataatacatggtattaatgttcatgat
tgtgttccaactgggaatactaatattagaaattcacctgaacatagtggattttggaca
gtttcagatggtgatggaatttcagtatttaattcaaataatatttggattgatcattgt
tctttgtctaattgtcgtgatgggcttattgatgtaattcatggatcaacagctattact
atttcaaataactatatgactcatcatgataaggtcatgcttttaggacatagtgattct
tatacacaagataaggacatgcaagttactattgcttttaatcattttggtgaagggctt
gtccaaagaatgccaaggtgtagacatggatattttcatgtggtgaacaatgattacaca
cattgggaaatgtatgcaattggtggaagtgctaaccctacaatcaacagccaagggaac
agattccttgcaccagacaacagatttagcaaagaagtaacaaaacatgaagatggatca
gagagtgaatataatagttggaattggagatcagacggtgatttgttcttgaatggagca
ttctttagacaaactggtgctgatgcttcttctatctatgctagagcttcaagtcttagt
gcaagaccagcttctcttgttggttcaattactactacttctggtgttcttagttgcaag
aagggcaacctttgttga
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