Trifolium pratense (red clover): 123911060
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Entry
123911060 CDS
T08949
Name
(RefSeq) chloride channel protein CLC-c-like isoform X1
KO
K05016
chloride channel 7
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123911060
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123911060
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123911060
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123911060
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
123911060
Ion channels [BR:
tpra04040
]
Chloride channels
Chloride channel (CLC)
123911060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
123911060
NCBI-ProteinID:
XP_045818346
LinkDB
All DBs
Position
LG2:complement(56115140..56122320)
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AA seq
799 aa
AA seq
DB search
MTIFEKSSSEVPEKMDKEENLNNGEDVPDIENDGSLNGNDEEIGRYWAQYSERNMTYEEP
LLVKRINTTSQIAIVGSNLCPIESLDYEIFDNEMFNQDWRSRKKVQIFQYVVLKWVFALL
IGVGTGLVGLFNNISVENIAGFKLLLTTSLMSKQRFLEAFLAYAGLNMVLGAAAAALCAF
IAPSAAGSGIPEVKAYLNGIDAHSILAPNTLFVKIVGSILGVSAGFVVGKEGPMVHTGAC
IASFLGQGGSRKYGLTFSWLRHFKNDRDRRDMITCGAAAGVAAAFRSPVGGVLFALEEAA
SWWRSALLWRTFFTTAVVAIVLRAGIQFCSTGKCGLFGEGGLILYDVGSAQVSYSAGDIL
AVIVLGTIAGILGSIYNFLVDKVVRTYSIINEKGPFFKISLAVAISLLTSCCYYFLPWIA
TCIPCPSDSTVTCPSIDESGEYKSFQCPPGYYNDLASLFLNTNDDAIRNLFSPKINKEFH
MSSLFIFFAAVYFLGILTYGIAVPSGLFIPVILAGAAYGRVLSRLFEPITQLDRGLFSLL
GAASFLGGTMRMTVSICVILLELTNDLYLLPLVMLVLLISKSVADIFNKGVYDQILKIKG
LPYLEAHAEPYMRNIATRDVVSGPLMAFSGIEKVGNILHVLNTTGHNGFPVIDEPPFVDA
PELCGLVLRSYLLVLLKAKNFTSERVYADQSILENISVLDFGKAGSGKGVKLEDLDIQDE
DLDMYVDLHPITNTSPHTVVETMSLAKAAIIFRQHGLRHMCVVPKSQGRPPIVGILTRHD
FMPEHVLGLYPDIKHHKWH
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgactatttttgagaaatcatcaagtgaagttcctgagaagatggataaagaagaaaat
ttaaacaatggtgaggatgttcctgacatcgaaaacgatggtagcttgaatggcaatgat
gaggaaattggaaggtattgggcgcagtattctgaaaggaacatgacatatgaagaacca
cttcttgtgaagaggattaacactacctctcagattgctatagttggatccaacctttgc
cctatcgaaagccttgactatgagatttttgataatgaaatgtttaaccaggactggagg
tccaggaagaaggttcagatattccaatatgtggtacttaaatgggtatttgctcttctt
attggagtaggaactggacttgttggtcttttcaataatatttctgttgagaacatagcc
ggtttcaagctgcttctcacaaccagtctcatgtctaaacaaagatttcttgaggctttt
ctagcatatgctggtctgaatatggttttaggagcagcggctgcagcactctgtgctttc
attgcgccatcagcagccggctctggcattccggaggttaaagcgtatctcaatggcatt
gatgctcactctattctggctccaaacaccctttttgtcaagattgttggttcgatcctt
ggagtgtcagctggatttgtagtgggaaaagaaggacctatggttcatacaggagcatgc
atagcttcatttttgggacagggcggatctcgaaagtatggtttgactttcagttggctt
aggcatttcaaaaatgatagagaccggcgagacatgattacttgtggggcagctgctggt
gttgctgccgcctttcgatctccagtaggcggtgtcctctttgcccttgaagaggcagct
tcttggtggaggagtgctcttctttggagaacattttttactacagcagtagttgctatt
gttttaagagctggaattcagttttgttcaacgggaaaatgtggactatttggtgaaggc
ggtcttatattgtatgatgttggttcagcccaagtatcatatagtgctggtgacatattg
gcggtaatagtcttgggaactattgccggtattcttggaagcatatataatttccttgtc
gataaggtcgttcgtacgtatagcatcatcaatgaaaaaggtccatttttcaaaatctct
cttgctgttgcaatttctcttttgacatcatgctgctattatttcttaccatggattgca
acctgtatcccttgtccttccgattcgacggtgacttgtccctctattgacgagtctgga
gaatacaaaagctttcaatgtccaccaggctactacaacgatctcgcttccctctttcta
aacaccaatgacgatgctattcgtaatctattcagtccgaagataaacaaagagtttcat
atgtcaagtttatttatcttctttgctgccgtttactttcttggaatactcacttatggt
attgctgttccatctggacttttcattcctgtgatacttgccggagctgcttacggtcgt
gttctcagtagactctttgaaccaatcacccaactcgatcgaggactcttttctctccta
ggagctgcctctttcctcggtggaaccatgagaatgacagtctcaatctgtgttatatta
cttgaactcactaatgatctatatttacttccacttgtgatgttggtcttattaatctcg
aaatctgtggctgatattttcaacaaaggtgtctatgatcaaatattgaaaatcaaagga
cttccttatttggaagcacatgccgaaccttacatgagaaacatagctacgcgtgatgtt
gtctcaggtccattaatggccttttctggcatcgaaaaggtcgggaatatcttacatgtt
ttgaatactacagggcacaacggatttccggtcattgatgaaccgcctttcgtggatgca
ccagagttgtgtggactcgtactgaggtcttatttactagttttactaaaggcgaaaaat
tttacaagtgagagggtttatgcggatcagagtatcttagaaaatatttctgtgttggat
tttggaaaggcaggatccggaaagggagttaaactagaggacttagatatccaagatgaa
gatttggatatgtatgttgatctacatccgataactaatacatctccgcacactgtggtt
gagacaatgtcacttgctaaagctgctattattttccgccaacatggactcaggcacatg
tgtgttgttccgaagagccaagggagacctccaattgtcgggattctgacgcgccacgat
ttcatgcctgaacatgttttgggactttaccctgatatcaagcatcacaaatggcactga
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