Trifolium pratense (red clover): 123911090
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Entry
123911090 CDS
T08949
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123911090
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123911090
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123911090
NCBI-ProteinID:
XP_045818392
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Position
LG2:complement(11263759..11265283)
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AA seq
391 aa
AA seq
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MVSNGTNSVPWSFVFAILIAIVFTPKFSFAKQSKLMGMKMNTIDRCWRPNPEWRKHRQQL
ATCSVGYVGKMTNNIGNDLIHYKVIDPNDDPINPKPGMLRYGASVIQGKVWITFQKDMNI
KLMKPLLISSFTTIDGRGVNVHIADNACLMISKATNIIIHSLRIHHCKAQAPGKVMGPNG
KVIHIGPVDGDAIRLVTASKIWIDHNTLYECEDGLLDVTRGSTNVTISNNWFREQDKVML
LGHDDGYLRDINMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPS
LKSESNLFIAPKVGSKEVIWRKIGNTNGDKWEFYSVRDAFENGASFMVTKGGRVLKPNYS
KEQSFEVVDVKSIRSLTRSSGAFKCSSTSIC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtatctaacggtaccaattctgtcccatggagctttgttttcgccattttaattgcc
atagttttcactccaaaatttagtttcgccaaacaatccaagttaatgggcatgaaaatg
aacacgattgatcgatgttggagaccaaatcctgaatggaggaagcatagacaacagcta
gcaacttgctccgtaggttatgttggaaagatgacaaacaacattggtaacgacctcata
cattataaagttattgacccaaatgacgatcccataaatccaaaacctggtatgttgaga
tatggagcttctgtaattcaaggtaaagtgtggatcacattccaaaaagacatgaacatt
aagctaatgaaaccacttctcattagtagtttcactaccattgatggtcgtggcgttaat
gtacacattgctgataatgcatgcttgatgatatccaaggccaccaacataatcattcat
agccttcgaatccatcactgcaaagctcaagcaccggggaaggtgatggggcctaatgga
aaggtaattcatattggtccagtagatggagatgcaattagattggtcacggcttcaaaa
atctggattgaccataatacactttatgaatgtgaagatggtcttcttgatgtcacaaga
ggttctactaatgtcactatatccaataattggtttagagaacaagataaggttatgctt
cttggtcatgatgatggatatttgagggacataaacatgaaggttactgttgtctacaat
cattttggacctaactgcaaccaacgaatgccaagaattcgacatggatatgcacatgta
gccaacaatctttacttagggtggatgcaatacgccatcggtggaagcatggggcctagc
cttaaaagtgaatctaatctcttcatagcaccaaaagttgggagtaaagaggtaatatgg
agaaaaattggcaatacgaatggagacaaatgggaattttattcggttagggatgcattt
gaaaatggagcctctttcatggtaacaaaaggaggacgtgtgctgaagcctaattatagc
aaagaacaaagttttgaagttgttgatgtcaaatctattagatcattgacaagatcatca
ggtgcatttaaatgcagtagtacctctatatgttga
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