Trifolium pratense (red clover): 123911161
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Entry
123911161 CDS
T08949
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123911161
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123911161
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123911161
Protein phosphatases and associated proteins [BR:
tpra01009
]
HAD phosphatases
Fcp/Scp phosphatases
123911161
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123911161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
123911161
NCBI-ProteinID:
XP_045818474
LinkDB
All DBs
Position
LG2:70666061..70674957
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AA seq
690 aa
AA seq
DB search
MNRLGFKTEVFEGDVRLGELDYFPVTAFQNFRFPNNEIRIHHRTYRSERCPPLSILQSIS
AFNVRCKLDSSLSVEQPLLINLHASCFHEMKTAVAVVGDEELHLVAMPSKRKKFPCFWCY
AVPVGLYDACMGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRCWLLRESDPLRVQG
MSGELKRYLEDRLLLKQFIEMDSVVDSNGKLYQVQMEEVPSLSEQKVLRPVVRLQDRNIV
LTRINPEIRDTSVLVKLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPGA
HLIGSKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FSPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENFIQRIAEIFFEDEVVNLPHPP
VVSSYLMSEEAPNGNGNAYVPVSEGMGGTEFERRLNQPDDKVSADLVSRPMANSADFRHE
NSQPTAGMIPNVTGHRSSRPIIPSQKDAISPNHASSNGRDLQNEVGKLNFIPSLSIRMLL
EIGRRLSKKVEFRSVVSTSKDLQFSVEVLYTDEKIGFGMGRTRRDAQQLAAENALRSLAE
KYVTNMEPLCKAVNRELDDLSLEHENGFLWDEVNPESSELQTEDGLQRESASEASDAETR
PLKSNPVNQQNEKRSFPRTPQPVSSKRLKE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttagggttcaaaactgaagtgtttgaaggcgacgtgcgtttaggcgaactt
gattattttcctgtaaccgcttttcagaacttccgatttccgaacaacgagattcgcatc
caccatagaacttaccgtagtgaacgttgtcctcctctttccattcttcaatcgatttcc
gctttcaatgttcgatgtaaactcgattcctcactttccgttgaacaaccgcttttaatc
aaccttcacgcttcttgttttcatgaaatgaagactgcggtggctgtggttggggatgag
gagcttcatctggtggccatgccgagtaagaggaagaagtttccgtgtttttggtgttat
gctgttcctgtgggactttatgatgcctgtatggggatgttgaatttgaggtgtctttca
attgtgtttgatttggatgagactttgattgttgcgaacaccatgaagtcgtttgaggat
aggattgaggcgttgaggtgttggcttttgagggagagtgatccgttgagggtgcaaggt
atgtctggtgagctgaagcgttatttggaggataggttgttgttgaagcagtttattgag
atggattctgtggttgatagcaatgggaagttgtatcaggttcagatggaggaagttccg
tctttgtctgaacagaaagttcttcgccctgttgttcggttgcaagataggaatattgtt
cttactcgaatcaatcctgagattcgggatactagtgtactagtgaagttacggcctgct
tgggaagatttaagatgctatttaactgcaaaaggacgaaagcggtttgaagtgtatgtt
tgtactatggctgaaagagattatgctttggaaatgtggaggcttcttgacccaggggca
catcttataggttcaaagcaagtatttgatcgtgttatttgtgttaaatcaggctccaga
aaatctttactaaatgtttttcacgatggtatgtgccatccaaaaatggcaatggtgatt
gatgaccgttcaaaggtttgggaggacaaggaccagcccagggttcatgttgtccctgca
tttagtccttactatgctcctcaagcagagacagccaatgccgtcccagttctatgcgta
gcgagaaatgttgcatgcaatgtcagaggttgttttttcaaagaatttgatgagaacttt
atacaaagaattgctgaaatcttctttgaagatgaggttgtaaatttacctcaccctccg
gttgtgagcagctacttgatgtctgaggaggcgccgaatggtaatggtaatgcttatgtc
cccgtcagtgaaggaatgggcggcacagagtttgaacggaggttaaaccaacctgatgat
aaggtttctgctgatttagtcagtcgacccatggcaaacagtgctgatttcagacatgaa
aactctcagccaactgctggcatgattccaaatgtcacaggccacagatcttcaaggccc
ataattccttctcagaaggatgcaatatctccgaatcacgcgtcttctaatggcagagat
ttacaaaatgaagttggaaaattgaactttataccatctctatctattagaatgctgcta
gaaattgggaggcggttgtccaaaaaggttgaatttaggtcagttgtaagcaccagcaaa
gacttgcaattttcagtggaggtactatacactgatgagaaaataggctttggtatgggt
aggacaaggagggatgctcaacaactagctgccgagaatgcccttcgcagcttagcagag
aagtatgtaacaaatatggagcctctatgtaaagctgttaatagagaattggacgatctt
tctcttgaacacgaaaatggtttcttgtgggatgaggtcaatccggaatccagtgaactg
cagacagaagatggattacaaagagaaagtgcttcagaggcttcagatgctgagacccgg
ccattaaaatccaatcctgtaaatcagcaaaacgaaaaacgtagcttcccaagaacgcct
cagcctgtatctagcaaacgattgaaggaatga
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