Trifolium pratense (red clover): 123911189
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Entry
123911189 CDS
T08949
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123911189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123911189
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123911189
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123911189
RNA polymerase I system
123911189
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123911189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
123911189
NCBI-ProteinID:
XP_045818520
LinkDB
All DBs
Position
LG2:complement(71062267..71066120)
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AA seq
115 aa
AA seq
DB search
MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLQMEEEQDRAVECTTPNFN
GVISVMDPTRSWAARWLRIGKFVPGVYTLAVSEALSEEMQAICEDKHVQYMPPRR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcacctgctcaaattcctacaagctttggacatgaattgagggcctgtctt
cgttgccgccttgtcaaaacctacgatcagtttagagagtcagggtgtgagaactgccca
tttttacagatggaagaagaacaagatcgtgctgttgaatgcactacccccaattttaat
ggggtcatttcagtaatggatccaactcgaagctgggctgcccgctggttgcgcattgga
aaatttgttcctggtgtttacactcttgctgtctcagaggctctttcagaagagatgcag
gctatttgtgaagataagcatgtgcaatatatgcctcccagacgttag
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