KEGG   Trifolium pratense (red clover): 123911343
Entry
123911343         CDS       T08949                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123911343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123911343
   03036 Chromosome and associated proteins [BR:tpra03036]
    123911343
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123911343
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123911343
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 123911343
NCBI-ProteinID: XP_045818703
LinkDB
Position
LG2:31188409..31194964
AA seq 349 aa
MANFLSNSSSNPNPNKSIEVNQPPTDSISSLNFSPKSNLLVATSWDNQVRCWEVARDGAN
VATMPKASIAHDHPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPITVAMHDAPINQI
AWIPEINLLATGSWDRTIKYWDTRQPNPAHTQQLPERCYAMTVKHPLMVVGTADRNLIVY
NLQNPQAEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQAKNFTFKCH
REGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPVPCSAFNNDG
SIYAYAVCYDWSKGAENHNPATAKTNIFLHLPQESEVKGKPRIGATGRR
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcgaatttcttgtcaaactcttcttccaatccaaaccctaacaaatccattgaggtg
aatcagcctccaactgattctatttcaagtctcaatttcagtcccaaatccaacttactc
gttgcaacttcatgggataatcaggttcgatgttgggaggtagcacgtgatggagcaaat
gttgctactatgcctaaggcttctatagcacatgatcatccggttttgtgctctgcttgg
aaggatgatggaacaactgttttttctggtggatgtgataagcaagtcaaaatgtggcca
ctgttgtcaggaggacaaccaattactgtagccatgcacgatgcacctatcaaccagatt
gcttggattcctgagattaaccttttagccacaggaagctgggacaggactattaagtat
tgggatacaaggcaaccaaatccagcgcacacacaacaactcccggagcgctgctatgca
atgacagtgaaacatcctctcatggttgttggtactgctgatagaaaccttattgtttac
aacttgcaaaatcctcaggctgaattcaagagaattgtttcgcccttaaagtatcagaca
aggtgccttgctgcattccctgatcaacaaggtttcttggttggatcaatagaaggaaga
gttggagtgcatcatttagatgatagtcagcaggctaaaaacttcactttcaaatgccac
agagaggggaatgaaatatactcggtcaactctttaaatttccatcctgtgcaccacaca
tttgctactgctggttctgatggtgctttcaatttttgggacaaggatagtaaacagagg
cttaaggccatgttaagatgcagccaacctgttccttgcagcgccttcaacaatgatggt
tcaatatatgcttacgcagtttgctatgactggagtaaaggggcagaaaatcataatccg
gcaacagcaaagaccaacattttcctgcacttaccacaggaatctgaggtcaagggcaaa
ccgcgcattggtgcgactggaagaaggtag

DBGET integrated database retrieval system