Trifolium pratense (red clover): 123911396
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Entry
123911396 CDS
T08949
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123911396
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123911396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
DNA_primase_S
nSTAND_NTPase5
AAA_14
AAA_29
Motif
Other DBs
NCBI-GeneID:
123911396
NCBI-ProteinID:
XP_045818756
LinkDB
All DBs
Position
LG2:64016240..64026242
Genome browser
AA seq
790 aa
AA seq
DB search
MEDDGGEGSSFIVSIIENRAKEVGLAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI
VIIVPPNKYSSTSTVTELVDRYYGSVKKAVLSRGCFDDTKGAILIKNLASKDPSALGLDT
YYKQYYLCLAAAAAALKWTEAEKGIVVTNHSLSVTFNGSFDHMNIDATSVQNLEIIDPFH
SALLGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIKTINARLDCLDELMNNEQLF
FALCQVLRKFPKETDRVLCHFCFKPKKVTIEAMSVDRAKKSQVLVSSVILLKTALDALPL
LSKALKDAKSSLLSNIYTSVCENEKYELIKKRIEEIIDEDVLHARVPFVACTQQCFAVKA
GIDGLLDISRRSFCETSEAIHNLANTYREDFKLPNLKLTFKNRQGFHFVIPQKNIQGKLP
SKFIQVVKHGNNIHCSTLELASLNARNKSAAAECYTRTEFCLEELMDAIRENVSALTLLA
EILCLLDMIVNSFAHMISTKPVDQYTRPEFTESGPMAIDSGRHPILESIHNDFVANNIFL
SEASNMVIVTGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTLRVVDRVFTRMGAVDNL
ESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEHLLSLRAYTI
FATHMENISELATIYPNVKILHFHVELKNNHLEFKFQLKEGPKHIPHYGLLLAEVAGLPS
SVVETARMITSRISEKEKKRMEVNCLQNHSIQSAYHVAQRLLCLKYSNQDEDTIRQALRN
LKEYCIKQRL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggtggagagggttcaagcttcatagtcagcatcatcgaaaatagagct
aaagaggttggattagctgcttttgatttgaggtctgcttcactgcacctttcacaatat
attgaaacaagcagttcatatcaaaacacgaagacgttgctgcatttttatgatcccatt
gtgatcattgttcctccaaacaagtacagttctacaagtacagttacagaattggttgat
agatattatggttcggttaagaaggcagtgttgtcccgtggttgttttgatgacacaaag
ggcgctatcttaataaaaaacctagcttctaaggatccttcagcacttggtttggacact
tattacaagcagtattatctgtgcttggctgccgctgccgctgctttaaagtggacagaa
gcagaaaaagggattgttgttaccaatcactcattgtcggtcacctttaatggatcattt
gatcacatgaatattgatgcaaccagcgtccaaaatttggaaattattgatccatttcat
tctgccctactgggaacaagcaacaaaaagagaagtctttttcacatgctcaagacaact
aaaactattggagggactaggctccttcgcgccaatttgttgcagcctctaaaagacatt
aaaacaatcaatgctcgtcttgattgcctagatgagctgatgaacaacgaacagctattt
tttgctctctgtcaggttttgcgtaaatttccaaaagagactgatagagtattatgccac
ttctgctttaagccgaagaaagttacaattgaggccatgtcagttgatcgtgctaaaaag
agtcaagtgctagtatcaagtgtaatactccttaaaactgctttagatgcccttccatta
ttgtctaaggcgcttaaggatgctaaaagttcccttctctcaaatatctacacatctgtt
tgtgaaaatgaaaaatacgaactcattaaaaaaaggatagaggagattattgacgaagat
gtgcttcatgcgcgggttccttttgttgcctgcactcagcaatgctttgctgttaaggct
ggaattgatggtctcttggatatttcacgaagatcattttgtgaaaccagtgaagctatc
cacaatcttgcaaacacttatcgagaggatttcaagttgccaaatttaaagcttacattc
aaaaacaggcagggatttcattttgttataccacaaaagaatattcaaggaaagcttcca
agcaagttcattcaggttgtaaaacacgggaacaacattcattgctcaactttggaacta
gcatctttgaatgctaggaataaatctgcagctgcagaatgctatacaagaacagagttt
tgtctggaagaactaatggatgcgattcgtgagaatgtctctgcattgacactgctagct
gagatcttgtgcttgttagatatgattgtgaactcttttgctcatatgatctcaactaag
cctgtcgatcaatatacaagaccagaatttacggagagtgggccaatggcaattgattct
ggtaggcacccaatcttggagagcatacacaatgattttgttgccaacaatatatttctg
tctgaagcctcaaacatggtgattgtgacaggccctaatatgagcggaaagagtacttac
cttcaacaagtgtgtctcatagttattcttgctcaagttgggtgttacgttcctgctcgc
ttctcaactctgagggtagttgatcgtgttttcacaaggatgggtgcagttgataatctt
gaatcaaactctagcacgttcatgacagagatgaaagagacagcttttatcatgcagaat
gtttcacagaggagtctgattgttatggatgaacttggtagggctacttcttcatctgat
ggatttgcaattgcatggagttgctgcgagcatcttttgtcacttagagcgtataccata
tttgccactcatatggagaatatatcggaattagcaacaatctatcccaatgtcaaaatt
cttcactttcatgtcgaattaaaaaacaaccatttggagttcaagtttcaacttaaggaa
ggaccgaaacacatcccccattatggtcttctcttagcagaagtggcaggattaccaagt
tcggttgttgagactgccagaatgatcacatcaagaatttcagaaaaggaaaagaaaagg
atggaagtcaactgtttgcagaatcactcaatacagagtgcttatcatgttgcacaaagg
ttgttatgcctgaaatattccaatcaagatgaggatacaatccggcaagctttgcggaat
ctcaaggaatactgcatcaagcaaaggctttaa
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