Trifolium pratense (red clover): 123911471
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Entry
123911471 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123911471
03036 Chromosome and associated proteins [BR:
tpra03036
]
123911471
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123911471
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Helicases
123911471
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123911471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
123911471
NCBI-ProteinID:
XP_045818847
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All DBs
Position
LG2:complement(49107350..49112083)
Genome browser
AA seq
712 aa
AA seq
DB search
MPSLSITNDAVSMESPKQKSLKKKKEKLQNDIVMEEESAKKSSKKRKKSSDDDEETKSGT
SSDEGSRMKVKKEKKKKKSKVEDDEEVEAVVVKKDDPNAVSNFRISEPLKMKLKENGIEA
LFPIQAMTFNTILDGADLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRVPSVL
VLLPTRELANQVYADFELYGSSLGLAACAVYGGAPYGPQENKLRRGVDIVIGTPGRIKDH
IEKGNIDLSHLKFRVLDEADEMLRMGFVDDVELILGKVQDVTKVQTLLFSATLPSWVKQI
STKFLKADKKTADLVGNEKMKASTNVRHIILPCNHTAMAQLIPDIIRCYSSGGRTIIFAE
KKESASELAGLLPGARALHGDIQQSQREVTLKAFRSGKFMTLVATNVAARGLDINDVQLI
IQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNIAKIEREAGIKFEHVSAPQPDE
IAKAMGGDAASMITEVSDSVIPAFKSAAEELLKNSGLSAVELLAKALAKAVVSTLSFLFF
LYIIYNLFSRCIKKPSSICFSDLEKCYLQGYTDVKKRSLLTSMENYVTLILEGGKPMFTP
SFAFGTLRRFVPEDKVDAVQGLALTADGQGAVFDVPAKDLDVFLNSQKNAVNVSLKIAKE
LPSLQQREDNRPSRYGGGRGFSGGRNGGFRFGGRSGGGGRGFGGGRGGGKRW
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactatctataactaacgacgccgtttcaatggaaagccctaagcaaaaatca
ctgaagaagaagaaggaaaagcttcaaaacgacatcgttatggaggaagaatcagcgaag
aagagttcaaagaagaggaagaaatcttcagatgatgatgaagaaactaagagtggaact
agctccgatgaaggttctagaatgaaagtgaagaaggagaaaaagaagaagaaatcgaag
gttgaagatgatgaagaagttgaagctgttgttgtgaagaaggatgatcctaatgctgtt
tcgaattttagaatttcggaaccgttgaagatgaaattgaaggaaaacggtattgaagct
ttgtttccgattcaagctatgacttttaatactattcttgatggtgctgatttggttggt
cgtgctcgtactggtcagggtaaaactctggcatttgtgttgcccatattagagtcattg
acaaatggtccagctaaatcggttagaaaaactggttatggaagggtcccaagtgtcctc
gtgcttttacctactagggaattggccaatcaggtgtatgccgactttgaactttatggt
tcgtccctgggattggctgcttgcgctgtatatggtggagctccatatggacctcaggag
aataagctcaggagaggtgttgatatcgttattggaacaccaggtcgtattaaggatcat
attgagaagggaaatattgacctgagccacctaaagttccgtgtccttgatgaggctgat
gagatgttgaggatgggttttgttgatgatgttgaactcattctaggcaaggtacaagat
gttactaaagtacagacccttcttttcagtgctacgttgccaagctgggttaagcaaatt
tctacaaaatttctgaaagcagataagaaaactgctgatcttgttgggaatgagaaaatg
aaggctagcaccaatgttaggcatattattcttccatgtaatcatactgctatggcacag
cttatccctgacattattcgctgttatagcagtggaggccggacaattatatttgccgag
aaaaaggagtcggcttcagagcttgctggattgttgcctggtgcaagagctctccatggt
gatatacagcagtcacaacgtgaggttacattgaaagcttttaggtctgggaaattcatg
acattggtggcaaccaatgtggcggctaggggtctagacattaatgatgttcagttgatt
atccagtgtgagcctccccgggatgtagaagcatatatacatcgatctgggcggacagga
agagctggcaacactggagttgctgtgatgctttatgatcccagaaggtcgaatatagct
aaaatagaaagagaagcaggtataaaatttgaacacgtatctgctcctcagcctgatgaa
attgccaaagctatgggtggggatgctgcttcaatgattactgaagtgtctgatagtgta
attcctgcattcaaatctgctgctgaggaacttttgaagaactctggtttatcagctgtt
gagttacttgcaaaagctcttgccaaggctgttgtaagtacattatccttcctttttttt
ctctacataatttataatttattttctcgatgtattaagaaaccatcatccatatgtttc
tctgatttggaaaaatgttatttgcagggttatactgatgtaaagaaaagatcactactg
acttcaatggagaattatgttacattaattcttgagggaggaaaacctatgttcacccca
tcctttgcatttggaaccctgaggagatttgtacctgaggataaggttgacgcagtacaa
ggtcttgctctaactgcagatggacagggtgctgtttttgatgtaccagccaaggacttg
gatgtatttcttaacagtcaaaagaatgctgttaatgtaagcctaaagattgctaaggaa
ttgccaagtttacaacaaagagaggacaatagaccaagcagatatggtggtggccgtggg
ttttcaggtggaagaaacggagggtttaggtttggtggaagaagtggtggtggcggaaga
ggttttggaggaggcagaggaggtggaaagagatggtaa
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