Trifolium pratense (red clover): 123911537
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Entry
123911537 CDS
T08949
Name
(RefSeq) transcriptional elongation regulator MINIYO
KO
K20826
RNA polymerase II-associated protein 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123911537
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123911537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Thiaminase_I-like_N
Motif
Other DBs
NCBI-GeneID:
123911537
NCBI-ProteinID:
XP_045818928
LinkDB
All DBs
Position
LG2:complement(25372567..25383413)
Genome browser
AA seq
1577 aa
AA seq
DB search
MEKQNGEKMEAKKVKILNTSSLQINQQDAFRLVGSIVEKGIDNDGVSQNKPNPFYSFPKP
TVVPFPVARHRSHGPHWSPLNSKGGYDHDNDASDNDVEDEEDSDLMGFEKVAAFANPVHR
KKKKGLDLGKWKEITQDDKSSVGMDLEKDVSISSQTTGKKKNGKGGKITEKKISSDSDDS
AFASMEVDAKPQLDKSDDGFINSGASMELDTSNKEDHQKKVEYAVTFDDKKEKEFASKQD
QICTDRMPDHSSTSDKNDFIHEQESTSLESEIDSENRARIQQMSAEEIAEARADIMEKIS
PSLLKVLQKRGMEKLKKPNSSKSEVGTVSKSVNQQVQSTQEAKRLQTEDNISKKQLDDKN
VSGKTSTTTSSSAWNAWSNRVEAVRELRFSLSGDVVDTEQEPVYDNITERDYLRTEGDPG
AAGYTIKEALALTRSVVPGQRSLALHLLSSVLDKALSYICKDRTGNMTQKGNEVEKPVDW
VAVWTYALGPQPELALSLRICLDDNHNSVVMACAKVVQSALSCDVNENYFDISENMATCD
KDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNILPFSGDSMDNESDEKHTIQDDVFVAG
QDFTAGLVRMGVLPRLRYLLENDPSAALEECVVSILIAIARHSPSCANAVLKCERLIQTI
VQRFTVGNFEIRSSMIKSVKLLKVLARLDRKTCLEFIKNGYFNAMTWNLYQLPLSIDDWL
KLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFSQIFPALCFWLDLPSFEKLIKNNVLY
ESTCISREAYLVLESLAGRLPNLFSQQCLTNQHPESTDDTEFWSWSYVGPMVDLAIKWIA
TRSDPEVSKLFEGQEGVSDFTLGGDLSATPLLWVYAAVTHMLFRVLEKVTLGDAITLQEA
NGHVPWLPEFVPKIGLELVKYWHLGFSVAFGTKSGRDSGDESFMKDLIHLRQKGDIEMSL
ATTCCLNGMINIITKIDDLIRSAKTGVRSPPGQEQSLSKEEKVLKEGIVSSCLFELRSML
DVFIFSASSAWQRMQSIEIFGRGGPAPGVGVGWGAQSGGFWSKTVLAVQTDARFLVYLLE
IFENASKYVTNIEEETTFTMQRINTALGLCLTAGPGDTVIMEKALDLLFHVTVLKHLDLC
IQNFLLNRSGKAFRWQYEEDDYMHFSRNLSSHFKSRWLSVRVKSKAVDGSSSSGIKATPK
DDVRLDTIYEDSDMSSMTSPCCNSLIIEWARQNLPLPVHFYLSPISTIPLTKRAGPKKSG
SVHSTHDPTNLLEVAKCGLFFVLGIETMSNFQGTAIPSPIQHVSLTWKLHSLSVNFLVGM
EILEQDQGRETFEALQDLYGEVLDKERLKRNKEVILDDEKHIEFLRFKSEIHESYSIFIE
DLVEQFASISYGDLIFGRQVSLYLHRCVETSIRLATWNALSNARVLDLLPPLEKCFSGAE
GYLEPAEDNEEILEAYAKSWVSDALDRAAIRASVSYTIAVHHLSSFIFNACPTDKLLLRN
RLIRSLLRDYVGKQQHEGMFMNLICHNKQSTSDMNEQLDEKNWLESRMKVLIEACEGNSS
LLTHVKKLKAAAEKSSL
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaaacggcgaaaaaatggaagcaaagaaagtgaagatactgaacacgagc
tcactacaaataaaccaacaagatgcatttcgtttggttggttcaattgtagaaaagggt
attgataatgatggtgtctcacaaaacaagccaaaccctttttactcttttcctaaaccc
actgttgttccttttcctgttgcacgtcatcgttctcatggtcctcattggtctccactg
aatagtaaagggggttatgatcatgacaatgatgctagtgacaatgatgttgaagatgaa
gaagacagcgacttaatggggtttgagaaagttgctgcctttgctaatccagtgcatagg
aagaagaaaaagggtttggatttgggaaaatggaaagagataactcaagatgataaatct
tctgtagggatggatttagaaaaggatgtatcaatctctagccaaactacagggaaaaag
aagaatggaaaaggtggtaagattacagaaaagaaaatctcatctgattccgatgatagt
gcatttgcttctatggaagtggatgctaagccgcagttagacaaatcagatgacggtttt
atcaattctggcgcttccatggaattagatacttcaaataaggaggatcatcagaaaaaa
gttgaatatgccgtaacttttgatgacaagaaagaaaaggaatttgcttccaaacaagac
caaatatgcactgatagaatgcctgatcacagttccacatctgacaaaaatgacttcata
catgaacaggagtccacatctcttgagagtgaaattgattctgagaatcgagctcggatc
cagcaaatgtcagctgaggagattgcagaagccagggctgatataatggagaagataagt
ccttcgttactgaaagtactgcaaaaaaggggtatggagaaattgaagaaacccaatagt
tctaaatccgaagtgggtactgtttcaaaatctgttaatcaacaagttcagagtactcaa
gaagctaaacgtttgcagacagaggataacatctccaaaaaacagttggatgataagaat
gttagtggaaagacttcaaccaccacaagtagtagtgcatggaatgcttggagcaataga
gttgaggccgttagggaattacgattttcattgtctggggatgttgttgatactgaacag
gagcctgtgtatgataatatcactgaacgtgactatttgaggactgagggagatcctggt
gcagctggttatacaattaaagaagcactggcacttacaagaagtgtggtgcctggacaa
agatcccttgcattgcatctcctttcatctgttcttgacaaggcactaagctatatttgc
aaagacagaactggaaatatgacacaaaaggggaacgaagtcgaaaaaccagttgactgg
gtggctgtttggacttatgcacttggtcctcaaccagagcttgcgttgtcactaaggata
tgtctcgatgataaccacaattcagtggttatggcctgtgcaaaggttgttcaatctgca
ttgagttgtgatgtgaatgagaactactttgatatctcagagaacatggcaacttgtgat
aaagatatttgcacagctccagtttttaggagcaggccagatatttctcttggattcctt
cagggaggatactggaagtacagtgcaaaaccttctaatattctaccttttagcggggat
tctatggataatgagagtgacgagaaacacacaattcaagatgatgtatttgttgctgga
caagattttactgcaggcctagttcgcatgggtgtccttcctagacttcgttatcttttg
gagaatgatcctagtgcagctttggaagagtgtgttgtttctatactgattgccatagca
aggcattcaccttcatgtgctaatgcagtgctgaagtgcgaaagacttattcagacaatt
gtgcaaagatttactgttggcaattttgaaattcgatcttccatgataaaatctgtaaaa
ctcttgaaggtcttagctcggttggaccggaaaacttgtttagagtttattaagaatggg
tacttcaatgccatgacttggaatttatatcaacttcctttgtccattgacgactggcta
aagttagggaaggaaaaatgtaaactcaagtctgctctgactattgaacaactgcgtttc
tggagggtttgtattcgatatggatattgtgtgtctcatttctcccagatattccctgcc
ttgtgtttttggttggatcttccttcatttgaaaaacttatcaaaaataatgttctgtat
gaatctacttgcatatctagggaggcatatcttgttttggagtctttggccggaagactt
ccaaatttattttcacagcagtgtctaacaaatcaacatcctgagtccactgatgatact
gagttctggtcttggagctatgttggtccgatggttgacttagccataaagtggattgca
acaagaagtgatccagaagtatctaaattgtttgagggacaagaaggggtaagtgacttt
actttaggaggagatctttccgcaactcctttgttatgggtgtatgcagctgtgactcac
atgcttttcagagttcttgaaaaagtgacattgggggatgctatcaccctacaggaagct
aatgggcatgtaccatggcttccagaatttgtcccgaagattggacttgagttggtgaaa
tattggcatttgggcttttcagttgcctttgggacaaaatctggaagagattctggtgat
gaatcttttatgaaggatctaattcatttgaggcagaagggtgatattgaaatgtctttg
gctaccacttgttgcctaaatggaatgatcaatattattactaagatcgatgatctgata
cggtctgccaagactggcgttcgtagtcctccaggtcaagaacaaagtctatcaaaagaa
gaaaaagtgcttaaggaaggtatagttagtagctgtctgtttgaattaaggtctatgcta
gatgttttcatattttcagcttcttcggcatggcaacgcatgcagtccattgaaattttc
ggcagaggaggaccagctccaggtgtgggagttggctggggtgctcaaagtggaggattt
tggtcaaaaacagttttagcggttcaaacagatgcacgatttcttgtctatttgctggaa
atttttgaaaatgcatctaaatatgttaccaatatagaagaagaaacgaccttcaccatg
caacggatcaacactgccttggggttatgtttaaccgcaggacctggggatacggttatt
atggagaaggcattggatctattgttccatgtcactgttttgaagcaccttgacctctgt
atacagaattttctcctcaacaggagtggtaaagccttcaggtggcaatatgaagaagac
gactacatgcacttcagtcggaatttatcatcacatttcaagagcagatggttgtctgta
agggtgaagtctaaagccgttgatggcagtagttcttctggcattaaagccactccaaaa
gatgatgtgcgtttggatacgatatatgaggactcggacatgtcttccatgacaagtcca
tgctgtaattctttaattatagaatgggctcggcagaacctaccacttccggtccacttt
tatctcagtccaatctcaacaattccccttaccaagcgagctggtcctaaaaaaagtggt
agtgtacatagcacacatgatccgactaatttgcttgaagttgccaaatgtggacttttc
tttgttttaggtattgaaacaatgtctaattttcaaggaactgctattccttctcctatt
cagcacgtatcgttgacatggaagttacattcattatctgtcaatttccttgtcggaatg
gaaatacttgaacaagatcagggcagggaaacttttgaagctttacaggatctttatggt
gaggttcttgataaggaaaggcttaaacgaaataaagaagtaattttggatgatgaaaag
catattgagttcttgagattcaaatctgagattcatgagagttactcgatatttattgaa
gacctggtagagcagtttgcttccatatcttatggtgatctgatttttggacggcaagtt
tcactatatttacaccgctgtgttgaaacttctattcgactagctacctggaatgcgctg
tctaatgctcgtgttcttgatcttttgccacctttggagaaatgcttttctggtgctgaa
ggataccttgaacctgcagaggataatgaagagattttggaggcttatgccaagtcatgg
gtttctgatgcgcttgacagggctgcgattcgagcatcagtttcatatactatcgctgtc
catcacctttcgtcgttcatatttaatgcttgtccaacggataagttattgctgcgcaac
aggcttatcaggtctctcttgagagattatgttgggaaacagcaacatgagggaatgttt
atgaacctcatttgccataacaagcaatcaacatctgacatgaatgagcagctggatgaa
aagaactggttggagtcaaggatgaaagtattgattgaggcatgtgagggaaattcttct
cttctgacacatgtaaagaagttgaaggctgctgctgagaaaagttccttgtga
DBGET
integrated database retrieval system
