KEGG   Trifolium pratense (red clover): 123911906
Entry
123911906         CDS       T08949                                 
Name
(RefSeq) protein RDM16-like
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123911906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123911906
Spliceosome [BR:tpra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    123911906
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 123911906
NCBI-ProteinID: XP_045819154
LinkDB
Position
LG1:3990534..3992258
AA seq 564 aa
MDVTPYRRKRVRHSEGDRNDHRHHPSDRKTRDNKVYTKVRSKLKRDQEMEDDCDNNAAMG
SPAAAVSHEVTGKFSTDGSSSIAGKPGSFSIHALAKAKKVLQMQKDLSEKLKRIPPPASV
TTKADVTIPQKPTKAHVLRLDVHGREIDEHGNVVINVTKPSNLSTLKVNINKHKIDAFEI
LKPVLDFDPDSNPHFDESIGINKTKLMRPKRTNFVFVEEGKWSKHAESIKLKSKFGEAQA
KEHNAKQAQLAKAKAAPDINPNLIEITERNVMKEKLKDPIPEVEWWDVALLHSGNYGDID
EDKLKMEKITFYVEHVRPIEPPAQLAPPPPQPLKLTKQEQKKLKSQRRIAKEKERQEMIR
QGVIEPPKPKLKMNNLMKVLGTEATQDPTRLEKEVRNAAAEREQAHVDRNIARKLTPSEQ
REKKKRKLFDDSNTPDRLVALYKINNLSHPQTRIKVDLNAQYNQLTGCAVIYDGISVVVV
EGKSKTIKRYGKLMLRRINSEDSNDDKPANKCVLVWQGNVAKQNFNKFSVHDCITEAAAR
KVFMNAGVPHYWDHAVNYEDDGAA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggacgtcaccccctataggcgaaagagagttcgacattccgaaggtgaccgcaatgac
caccgccatcatccatctgaccgcaaaaccagggataataaggtatataccaaagttagg
tctaaattgaagcgcgatcaagagatggaagatgattgcgacaataatgctgctatggga
tcacctgctgctgcggtgtctcatgaggttactggaaaatttagtacagatggatcatct
tcaattgctggaaaacctggaagcttctctattcatgccttagctaaggcaaagaaggtt
ttacaaatgcaaaaagacttgtcggagaagctcaagagaattcctcctccagctagtgtc
acaactaaggcagatgttactatccctcagaaaccaaccaaggctcatgttcttcgtctt
gacgtccatggacgggaaatagatgaacatgggaatgttgttattaatgtaactaagcca
agcaaccttagcacattaaaggtcaacattaataaacacaagatagatgcatttgaaata
ctaaaacctgtgttggattttgatcctgattctaaccctcattttgacgagagtattggc
atcaacaaaacaaagctcatgcgccccaagaggacgaattttgtgtttgtggaagaagga
aaatggtcaaaacatgctgaatcaataaagttgaagagtaaatttggagaagctcaagca
aaagagcacaatgccaaacaagcacagctagcaaaggcaaaagctgctcctgatataaat
cccaacttaatagaaattacagagagaaatgtaatgaaagaaaagctgaaggatccaatt
ccagaagttgagtggtgggacgtggcacttttgcattctggaaattatggtgacatagac
gaagataaactgaaaatggaaaaaatcaccttttatgtggaacatgttcgccccattgaa
ccgcctgctcagcttgcccctccaccacctcaacctctcaagctaaccaaacaggagcaa
aagaaactcaagtcccaaaggcgtatagctaaggagaaggagcgacaagagatgattaga
cagggtgtcatagaaccgccaaaaccaaagttaaagatgaacaatttaatgaaagtgcta
gggaccgaagcaactcaagatcccactcggcttgagaaggaagtacgtaatgcagctgct
gagcgtgagcaggctcacgtagataggaatattgcacgcaagcttactccttccgagcag
cgtgagaagaagaaaaggaagctgtttgatgactcaaatacaccggatagacttgtggca
ctttacaagattaacaacctctctcatccacagactcgcattaaagttgatcttaatgct
caatataatcagttgactggatgtgctgtgatttatgatggtattagcgttgtcgtggtt
gaaggtaagagcaagacaattaagaggtatggaaaactaatgctcagacgtatcaattcc
gaagattcaaatgatgacaagcctgccaacaagtgtgttctggtgtggcaaggaaatgtt
gccaaacaaaacttcaataaattcagtgttcatgattgcatcactgaagcagctgctcga
aaagtgtttatgaatgctggggttcctcattattgggaccatgctgtcaactatgaagat
gacggcgctgcttga

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