Trifolium pratense (red clover): 123911906
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Entry
123911906 CDS
T08949
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123911906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123911906
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123911906
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
123911906
NCBI-ProteinID:
XP_045819154
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Position
LG1:3990534..3992258
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AA seq
564 aa
AA seq
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MDVTPYRRKRVRHSEGDRNDHRHHPSDRKTRDNKVYTKVRSKLKRDQEMEDDCDNNAAMG
SPAAAVSHEVTGKFSTDGSSSIAGKPGSFSIHALAKAKKVLQMQKDLSEKLKRIPPPASV
TTKADVTIPQKPTKAHVLRLDVHGREIDEHGNVVINVTKPSNLSTLKVNINKHKIDAFEI
LKPVLDFDPDSNPHFDESIGINKTKLMRPKRTNFVFVEEGKWSKHAESIKLKSKFGEAQA
KEHNAKQAQLAKAKAAPDINPNLIEITERNVMKEKLKDPIPEVEWWDVALLHSGNYGDID
EDKLKMEKITFYVEHVRPIEPPAQLAPPPPQPLKLTKQEQKKLKSQRRIAKEKERQEMIR
QGVIEPPKPKLKMNNLMKVLGTEATQDPTRLEKEVRNAAAEREQAHVDRNIARKLTPSEQ
REKKKRKLFDDSNTPDRLVALYKINNLSHPQTRIKVDLNAQYNQLTGCAVIYDGISVVVV
EGKSKTIKRYGKLMLRRINSEDSNDDKPANKCVLVWQGNVAKQNFNKFSVHDCITEAAAR
KVFMNAGVPHYWDHAVNYEDDGAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaccccctataggcgaaagagagttcgacattccgaaggtgaccgcaatgac
caccgccatcatccatctgaccgcaaaaccagggataataaggtatataccaaagttagg
tctaaattgaagcgcgatcaagagatggaagatgattgcgacaataatgctgctatggga
tcacctgctgctgcggtgtctcatgaggttactggaaaatttagtacagatggatcatct
tcaattgctggaaaacctggaagcttctctattcatgccttagctaaggcaaagaaggtt
ttacaaatgcaaaaagacttgtcggagaagctcaagagaattcctcctccagctagtgtc
acaactaaggcagatgttactatccctcagaaaccaaccaaggctcatgttcttcgtctt
gacgtccatggacgggaaatagatgaacatgggaatgttgttattaatgtaactaagcca
agcaaccttagcacattaaaggtcaacattaataaacacaagatagatgcatttgaaata
ctaaaacctgtgttggattttgatcctgattctaaccctcattttgacgagagtattggc
atcaacaaaacaaagctcatgcgccccaagaggacgaattttgtgtttgtggaagaagga
aaatggtcaaaacatgctgaatcaataaagttgaagagtaaatttggagaagctcaagca
aaagagcacaatgccaaacaagcacagctagcaaaggcaaaagctgctcctgatataaat
cccaacttaatagaaattacagagagaaatgtaatgaaagaaaagctgaaggatccaatt
ccagaagttgagtggtgggacgtggcacttttgcattctggaaattatggtgacatagac
gaagataaactgaaaatggaaaaaatcaccttttatgtggaacatgttcgccccattgaa
ccgcctgctcagcttgcccctccaccacctcaacctctcaagctaaccaaacaggagcaa
aagaaactcaagtcccaaaggcgtatagctaaggagaaggagcgacaagagatgattaga
cagggtgtcatagaaccgccaaaaccaaagttaaagatgaacaatttaatgaaagtgcta
gggaccgaagcaactcaagatcccactcggcttgagaaggaagtacgtaatgcagctgct
gagcgtgagcaggctcacgtagataggaatattgcacgcaagcttactccttccgagcag
cgtgagaagaagaaaaggaagctgtttgatgactcaaatacaccggatagacttgtggca
ctttacaagattaacaacctctctcatccacagactcgcattaaagttgatcttaatgct
caatataatcagttgactggatgtgctgtgatttatgatggtattagcgttgtcgtggtt
gaaggtaagagcaagacaattaagaggtatggaaaactaatgctcagacgtatcaattcc
gaagattcaaatgatgacaagcctgccaacaagtgtgttctggtgtggcaaggaaatgtt
gccaaacaaaacttcaataaattcagtgttcatgattgcatcactgaagcagctgctcga
aaagtgtttatgaatgctggggttcctcattattgggaccatgctgtcaactatgaagat
gacggcgctgcttga
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