Trifolium pratense (red clover): 123912412
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Entry
123912412 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 2-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123912412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123912412
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123912412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
Rad17
AAA_16
AAA_18
AAA_30
AAA_23
RsgA_GTPase
AAA
AAA_22
AAA_33
AAA_25
nSTAND3
NTPase_1
TsaE
NACHT
AAA_28
cobW
AAA_5
AAA_7
Zeta_toxin
PduV-EutP
RuvB_N
ABC_ATPase
RNA_helicase
Ploopntkinase3
AAA_17
T2SSE
AAA_19
VapE-like_dom
AAA_11
PDR_CDR
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
123912412
NCBI-ProteinID:
XP_045819172
LinkDB
All DBs
Position
LG1:complement(27611595..27618728)
Genome browser
AA seq
1456 aa
AA seq
DB search
MEAEMVEEDIFRPMSEGRKSKSFGELIRNSANEEEEELKWEGLWRLPTYDRMRKAILKQV
LDNGKVNYEEVDITKLGVEEKKLLLESILKTAEEDNENFLHKMRDRIDRVGIEIPKIEVR
FENLSVEGDAYDGTRALPTLINATLNVIEGLLSYIKILAFKKRVIRILKDISGIVKPSRM
TLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYNGNELSEFVPQRTCAYISQNDLHHGE
MTVRETLDFSGRCLGVGTRYDMLTELSRREKAAGIKPDPEIDAFMKATSMEGQETSLVTD
YILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTF
QIVRCMRQMVHIMDVTMIISLLQPAPETYNLFDDIVLLSEGEIVYQGPRESVLDFFESVG
FKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYEYVSVPDFVTNFNNYSIGKQLHEEIQV
PFDSSKTHHAALVKEKYGIPKWEIFKACFSSEWLFMKRSYFVYIFKTFQMTIMSLITLSV
FFRTTMDHGRLEDGGKFYGALFFSLVNVMFNGVAELAMTVNRLPVFFKQRDFLFYPAWTF
ALPIWVLRVPMSLLESGFWIILTYYTIGFAPSPSRFFRQLLAYFWVNQMALALFRFIAAI
GRTRVVSNTLASITILVVFVLSGFTVSRDDIGPWMIWCYYASPMMYGMTAITINEFLDER
WSAPNIDPRIDEPTVGKALLKARGIFTEDYWYWISIGALIGFSLLFNVCFILALTYLDPF
TSSKSIIVEQEDDRKNTTTSPEKTSGEMTESSASNVESFEGAEMEVRNKTHSSIPKAAKN
AKFKKGMVLPFQPLSLVFENVNYYIDMPNEMKQGTKEDRLQLLRDISGAFRPGILTALVG
VSGAGKTTLMDVLSGRKTSGYIEGGISISGYPKNQETFARISGYCEQNDIHSPNITVYES
LVFSAWLRLSKEVDIETRKMFIEEVIELVELRLVRNFLVGLPGIDGLSTEQRKRLTIAVE
LVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFENFDELLLM
KTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIGDGYNPATWMLDISSPVVESRLNIDFAE
LYNKSSLYQRNQELIKELSIPAPGTKELYFPSKYSQSFVTQCNACFWKQYCSYWRNPQYN
AVKYFVTIVIGVLFGLIYWNKGDKLDKEQDLLNLIGAMYSSVIFLGASNTNSVQPTVAVE
RTVLYRERAAGLYSELPYAIGQIAIEVIYVAIQSLIYSIILYWMIGFEPQVENFFWFYFF
IFMSFIYFTLYGMMTVALTPNHQIAAIVMSFFLSFWNLFSGFLIPRTQIPIWWRWYYWAS
PVAWTIYGLVTSQVGDKNSPIEVPGYRLMTVKEYLERQFGFEYDFLGFVVLAHIAFCLLF
LFVFAYGIKFLNFQKR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaaatggttgaagaagatatttttaggccaatgagtgaaggaaggaagagc
aagagttttggagagttaatccggaattcagcaaatgaagaggaagaggagctgaaatgg
gaaggtttatggagacttccaacatatgatagaatgagaaaagcgattttgaagcaagtt
cttgataatggaaaagttaactatgaagaggttgatattaccaagcttggtgtagaagaa
aagaaacttcttcttgagagtatacttaagactgctgaagaagacaatgagaattttctc
cacaaaatgagggacagaatagatagggtaggaattgagattccgaagattgaagtccgg
tttgagaatttatcagtcgaaggggatgcatatgatggaaccagagccttgccaacacta
atcaatgctacccttaatgtaatagagggacttttgagttacatcaagattttggcattt
aagaaaagggttataaggattctcaaagatattagtggaattgtaaaaccatcaagaatg
actttattattaggacctccaggttcaggaaaaaccacactgcttcaggcacttgccggg
aaaatggacaaggatctaagggtatcaggaagagttacttacaatggtaatgaattgtca
gaatttgttcctcaaagaacatgtgcttatattagtcagaatgatcttcaccatggagaa
atgacagtgagagagacgctggacttctccggacgctgcttgggtgttggaacaaggtac
gatatgttgacagaattgtcaagacgagaaaaagcagcaggtatcaaaccagatcctgaa
atagatgctttcatgaaagctacttcaatggaaggtcaagaaacaagtcttgttacagat
tatattctcaagattcttggactagaaacgtgtgccgatattttggtgggcgatgagatg
agaagaggcatatctggtggacaaaagaagcgtttaaccaccggtgagatgttagtggga
cctgcaaaagctctctttatggatggaatttcaactggtttggatagttccacaaccttc
caaatagtaaggtgtatgaggcagatggttcatataatggatgtcactatgataatctca
cttctgcaacctgcacccgaaacatataaccttttcgatgacatagtactactttcagaa
ggtgagattgtctatcaaggtccgcgtgagagtgttctagatttttttgaaagtgtcggc
ttcaagtgcccagaaaggaaaggaattgcagactttttacaagaggtaacttctagaaag
gatcaagaacagtactggttcagaagggacataccttatgagtatgttagtgtgcccgat
tttgtaaccaacttcaacaattacagcattggtaaacaacttcatgaagagattcaagtt
ccatttgattctagtaaaactcatcatgctgcattagtaaaggaaaagtatggaatcccc
aaatgggaaattttcaaggcatgcttttcaagcgaatggctattcatgaagcgcagctat
tttgtatatatattcaagacttttcagatgactatcatgtctttaattaccctgagcgta
ttttttagaacaacgatggatcatggtcgacttgaggatggaggaaaattttatggtgca
ctatttttcagtcttgtcaatgtgatgttcaatggagtagccgaacttgcaatgactgtt
aacagacttcctgttttctttaagcagcgagatttcctattttatcccgcatggactttt
gcattgcccatttgggtcctacgagttcctatgtctctattggaatcaggattttggatc
atcctcacttattatactattggttttgctccatcgcctagtaggtttttccgtcaacta
ttggcatacttctgggtgaatcaaatggctctagcccttttccgcttcattgctgcaatt
ggaaggacaagagttgtgtctaacacacttgcttccataacaattttagttgttttcgtc
ttaagtggatttactgtttcaagagatgatattggaccatggatgatatggtgctattat
gcttcacctatgatgtatggaatgactgcaataaccatcaatgaatttctagacgaaaga
tggagtgctcctaatatcgaccctagaattgatgaacctacagttgggaaggctttactt
aaggctagaggcatatttacagaagactattggtattggatatctatcggtgctcttata
ggattttctctactgttcaatgtttgtttcattctcgctctaacttacttggacccattc
acaagctccaaatctatcatagtggaacaggaagacgataggaaaaacacaacgacctca
ccggaaaaaacatcaggagaaatgacagaaagctcagcttcaaatgttgaatcctttgaa
ggtgcagaaatggaagtaagaaacaaaacacatagctcaattcctaaagctgcaaagaat
gcaaaattcaagaagggaatggtgttgccctttcagcctctgtcacttgtttttgaaaac
gtgaattattatatcgatatgccaaatgaaatgaagcaaggaactaaagaggatagactc
caactactaagagacataagtggtgcttttaggcctggaattttaacagcattagttggt
gtaagcggtgctggaaaaacgactttgatggatgtgctttcaggaaggaaaactagtggt
tacattgaaggaggtatcagcatatcgggttatcctaagaaccaagaaacgtttgctcgg
attagtggttattgtgaacaaaatgatattcattctcccaatattacagtttatgaatct
cttgtgttttctgcttggctgcggctcagtaaagaggttgatattgaaacacgaaagatg
tttatcgaggaagttatcgagctagttgagttacgtctagtgagaaatttcttagtcggc
cttcctggaatagatggcttatcaaccgagcagagaaagaggcttaccattgctgtagag
ttggttgcaaatccttccattatctttatggatgaaccaacaactggtcttgatgctaga
gctgcagcagttgttatgcgtactgttagaaacacagtcgatacaggaagaactgttgtg
tgcacaattcatcaaccaagtattgatatatttgaaaattttgacgagctgcttttgatg
aagacgggtggacaagtgatatatggtggtcctctaggtcgaaattctgagaaacttatc
gagtactttgaggcaattacaggaattccaaagatcggagatggatataatccagccaca
tggatgctggatatcagttctccggtggttgagtctcggcttaatatagatttcgctgaa
ttatacaataagtcaagcctttaccaacggaaccaagaacttatcaaggaactatccata
ccagcgcctggaacaaaggagctttactttccatctaaatactctcaatcatttgtaacg
caatgcaatgcttgcttctggaaacagtactgctcctattggagaaatccacagtataat
gctgtcaaatacttcgttacaatagttattggtgttttgtttggactaatttattggaac
aaaggcgataagttggacaaggaacaagaccttttaaatctcattggagctatgtattct
tcggtcattttcctcggtgcatccaacactaacagtgtgcagcctactgttgcagtagaa
agaacagttctataccgcgaaagagcagctggattgtactcagaactgccatatgcaatt
ggtcagattgctattgaagtaatttatgttgcaatccaaagtctgatatactctattatc
ctctactggatgattggcttcgaaccacaagttgaaaatttcttttggttctacttcttc
atattcatgtcctttatctacttcacattatatggaatgatgacggtggctcttacacca
aaccaccaaattgctgcaattgtgatgtctttcttcctcagcttttggaacctgttctct
ggttttcttattccaagaacgcaaattccgatatggtggaggtggtattattgggcatca
cctgtggcatggactatatatggactggtgacatcccaggtgggtgacaagaacagtccg
atcgaggttcctggatataggctgatgacagtaaaagaatatcttgagaggcaatttgga
tttgaatatgacttccttggatttgttgttttggctcatattgcattttgccttctcttc
ctttttgtatttgcctatggcatcaagtttttaaacttccagaaaagataa
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integrated database retrieval system
