Trifolium pratense (red clover): 123912889
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Entry
123912889 CDS
T08949
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123912889
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
123912889
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123912889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
DUF6058
Motif
Other DBs
NCBI-GeneID:
123912889
NCBI-ProteinID:
XP_045819428
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All DBs
Position
LG3:42944539..42950659
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AA seq
651 aa
AA seq
DB search
MAPATKKKPSKQLKVKKSPKKVQIVPVKEDSSTESEEEAPPQHLELGDDIADDDSASELS
SDGDEQLADDFLQGSDEEDENEEKASGSESGSGLGSDSDDDDDDDIVEKSRKIDEKRKRE
EADADAEMKTNIQEESDEFTLPTKQELEEEALRPPDLSNLQRRIKEIVRVLSNFKALRQE
ESTRKDYVEQLKHDIRSYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKT
RRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMA
LAPQEKERIIDMAAAPGGKTTYIAALMKNSGIIFANEMKIPRLKSLTANLHRMGVSNTVV
CNYDGKELPKVMGLNVVDRVLLDAPCSGTGVISKDESVKTSKNLDDIKKCAHLQKELLLA
AIDMVDSNSKSGGYVVYSTCSIMVAEVCFSVATCIHRVYMFPFLCPMFLKYFSLNIIQNE
AVIDYALSRRDVKLVPCGLDFGRPGFTKFREQRFHPSLDKTRRFYPHVHNMDGFFVAKLK
KMSSTKPIAKPSTKEKDEEIEPAKDNDKPNNDINENGRQSSESETRRIRRYRLQTKNGEK
ADVTETSEPEFKKRKKRKFNREEISKAREEKRLTLIENKRKAGKQQRKNDE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcaactaagaaaaaaccttcaaagcaactcaaagttaaaaaatcccccaaa
aaagtacaaattgttcccgtcaaagaagattcctccaccgaatcggaagaagaagcacca
ccacaacacctcgaactcggtgatgacatcgccgacgacgactcagcttcggaattatct
tccgatggagatgaacagttagccgatgatttcctccaaggaagcgatgaagaagatgaa
aatgaagagaaagcctcagggtcggaatctggttcgggtttgggttctgattcggatgat
gatgatgatgatgatattgtggagaaatcgagaaaaattgatgaaaaaaggaagagagaa
gaagccgatgctgatgctgaaatgaagaccaacattcaagaagagtctgatgagtttaca
ttaccaaccaaacaggaacttgaggaagaggctttgcgtccacctgatctttccaatcta
cagaggaggattaaagagattgtccgtgttctttccaattttaaggcattgagacaagag
gagtcgacaaggaaggattatgttgagcagcttaagcatgatatacgttcatactatggc
tacaatgagtttctaatcggtgctttggttgagatgtttccagttgttgaactgatggaa
ctgattgaagctttcgaaaagcctcgccctatatgtctgaggacaaacactttgaagaca
cggagacgggatttggcagatgtcttgataaacagaggagtaaatctggatcctctgagc
aaatggtccaaagttggacttgtcgtgtatgactctcaagtaccaattggtgccactcca
gagtacatggctggcttttacatgcttcaaagtgctagttcttttctgcctgtgatggcc
ttggctcctcaagaaaaggaacggattattgatatggcggctgcacctggtgggaaaaca
acgtacattgctgctctaatgaagaactctggaataatatttgcaaatgaaatgaagata
ccacgactgaagtctctgactgcaaatttgcatcggatgggtgtatcaaacactgttgtc
tgcaactatgatgggaaggagcttccaaaggttatgggtctcaatgttgtggatagggta
ctgttggatgccccttgcagtggaactggggttatatccaaagatgaatcagttaaaact
tctaaaaacttggacgatataaagaaatgtgctcatctacagaaggagcttcttcttgct
gcaattgacatggtagattctaattcaaaatctgggggatacgttgtatattctacatgc
tcaatcatggttgccgaggtttgtttttcagttgcaacttgcattcatagggtttatatg
tttccttttttgtgtcctatgtttctgaagtatttttccttaaatattattcagaatgaa
gcagttattgattatgcactcagtagaagggatgttaagctggttccatgtggacttgac
ttcgggcgtccagggtttacaaagtttagggaacagcgtttccatccttcgttagataag
acaagacgtttctatccacacgtacacaatatggatgggttttttgttgcaaagttgaaa
aaaatgagcagcactaaacccattgcaaaaccatcaacaaaggaaaaagacgaagaaatt
gagcctgcgaaggacaacgataaaccaaacaatgacataaatgagaacggcagacaatct
tctgaatctgaaaccagaagaataagaagatacagactacaaaccaagaatggtgaaaaa
gctgatgtcacagaaacttctgaacctgaattcaaaaagaggaagaaaaggaaatttaat
agagaggagatttcaaaagcaagagaggagaagagactgactttaatagaaaacaagaga
aaagctggcaaacaacagaggaaaaacgatgaatga
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