Trifolium pratense (red clover): 123912902
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Entry
123912902 CDS
T08949
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00270
Cysteine and methionine metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
123912902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123912902
03032 DNA replication proteins [BR:
tpra03032
]
123912902
03036 Chromosome and associated proteins [BR:
tpra03036
]
123912902
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tpra02048
]
123912902
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
123912902
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123912902
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
123912902
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123912902
Prokaryotic defense system [BR:
tpra02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
123912902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
123912902
NCBI-ProteinID:
XP_045819447
LinkDB
All DBs
Position
LG3:43078173..43087648
Genome browser
AA seq
1559 aa
AA seq
DB search
MGSVSLLNSSDSSQQVGVKDNNSIEEPVVSNTQEEVMTGGKKKKRGLSESGEQPAPTRKM
PKRSVSAARKNLKEQTFSISDKSSLIETKQDQIVEEEFLAVRMTAGQDDGRPNRRLTDFI
LHDETGAAQPLEMLEINDLFITGLILPLEGSADKKKEQGVRCVGFGRIESWDISGYEDGS
PVIWISTDIADYNCQKAAASYKKYYDHFFEKARACLEVYKKLAKSSGGDPDISLDELLAG
MARSMSGSKYFSGTVSLKEFIISQGGFIYKQLIGLELKANDKGFEDIPALIALRDESKKQ
ANFASAQVMPSNATLKIGSGTVDEEKKNQMDSVDEDEDAKLARLLQEEENWNSRKQRKNP
RSSSSSNKFYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDVYDIEDLPRSMLHN
WALYNSDSRLISLELLPMKPCSEIDVTIFGSGLMTADDGSGFNLDTEAGQSSSASGAQAT
DGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYTPWYDTVLKTARIAISII
TLLKEQSRVSRLSFADVIKKLSEYKQDHKSYISTDPMAVERYIVVHGQIILQLFAEFPDD
KIRKSAFVIGLAKKMEERHHTKWLVKKKKVMPRSEPNLNPRAAMAPVVSKRKAMQATTTK
LINRIWGEYYSNHLPEDLKEGTNSEVKDDDEVDEQEQEENEDVDADEEETVLLEGTQKPH
SVSKETKAFSDEREIRWEGAPEGKTSSGCLLYKQAIIHGEIVSVGISVSVEVDESDELPD
IYYIEYMFEAKNGRKMFHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQDVKQTNVVS
IRKMPWGHQYRKDNIVVDKLDRERADERKKKGLSTEYYCKSLYWPERGAFFGLPFDKLGL
GSGFCQSCKLEEAEKEKQIFKVNSSKSTFVLEGTEYSLNDYVYVSPFEFEERIEQGTHKS
GRNVGLKAYVVCQVLEIIVKKETKQAEIKSTELKVRRFFRPEDVSSEKAYCSDVQEVYYS
DETYTISVQSIEGRCEVRKKIDVPEGCTPGGIFHNVFFCEHLYDPTTGSLKKLPANIKVK
YSSGHTADAAARKKGKCKEGDSISEPDLERKTSNDKRLATLDIFAGCGGLSEGLHQSGVS
STKWAIEYEEPAGNAFKANHPEALVFIDNCNVILRAIMEKCGDLEDCISTTEAAELASKL
DEKDLSSLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILAFLSFADYFRPKYF
LLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDV
LPEWPEPMHVFSAPELKIKLSENVQYAAVCSTANGAPLRAITVRDTIGELPAVGNGASRT
NMEYQSDPVSWFQKKIRGNMAVLTDHISKEMNELNLIRCQKIPKKPGCDWRDLPDEKIKL
SNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRI
LTVRECARSQGFPDCYQFSGNIIHKHRQIGNAVPPPLAFALGLKLKEAVDRAHRPKSSG
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgtttctcttctcaattcttctgattcatcgcaacaagtaggtgttaaggac
aacaatagtatagaggaacctgttgtttcgaacacccaagaggaagttatgactggtggg
aaaaaaaagaagcgaggtttgtcagagagcggtgagcagcctgctcctactcgtaaaatg
ccaaaacgatcagtgagtgctgcacgcaaaaatttgaaggagcagactttttccatatcc
gacaaatcttctcttattgaaacaaagcaggatcagattgtagaagaagaatttctagct
gtccgtatgactgctggacaggacgatggccgtccaaatagaagacttacagactttatc
cttcacgatgagactggtgcagcgcaaccacttgagatgcttgaaatcaacgatttattc
atcactgggcttatattgccacttgaaggaagtgcagacaagaaaaaagagcaaggtgtt
agatgcgtaggctttggacgaattgagtcgtgggatatatctggctatgaagatggctct
ccagtgatatggatttccaccgatattgctgattacaattgccagaaagcagctgcaagc
tataaaaaatattacgatcatttctttgaaaaggcacgtgcttgcttagaagtatacaaa
aaactagctaagtcttctggtggagaccctgacataagtcttgacgagttacttgctgga
atggcacggtcaatgagtggtagcaagtacttttctggaaccgtgtctttaaaggagttc
attatttctcagggcgggtttatttataagcagctcattggtttagagttgaaggcaaac
gacaaggggtttgaagacattcctgctctgattgctcttagagatgagagcaaaaaacaa
gcaaactttgcaagtgcacaagtgatgccatcaaatgcaactttaaagattggttcggga
actgtagatgaggagaaaaagaatcagatggattctgtagatgaagatgaggatgcgaag
ttagcgcgactattgcaggaagaagagaattggaattctcggaagcagaggaaaaaccct
aggtcgtcctcttcgtctaacaaattctatatcaaaattaatgaagatgagatcgccaat
gattaccctctccctgcttattacaaaacctctcttcaagaaacagacgagtttattgtt
tttgataatgactatgacgtgtatgacattgaagatcttcctagaagcatgctgcataat
tgggctttatacaactctgattctagattgatttctttggaacttcttcctatgaaacct
tgctcagagatagatgttacaatctttggatcaggcctaatgacggcagatgatggaagt
gggttcaatctcgatacagaggcaggccaatcttccagtgcttctggagcacaggccaca
gatggaattccaatttatctgagtgccataaaggaatggatgattgaatttggatcgtct
atggttttcatatccatccgaacagatatggcctggtatagacttggaaaaccgtcaaag
cagtacactccttggtatgacaccgtattgaaaactgcaaggattgctataagcattatc
acattgttaaaggagcagagccgtgtatcgagactttcctttgcagatgttataaaaaaa
ttatctgagtataagcaagaccataagtcctacatttctactgatccaatggctgttgag
agatacattgttgtccatggacagataattctgcaactgtttgcagaatttccagatgac
aagatcaggaagtctgcttttgtgatcggtcttgctaaaaaaatggaagaacgacaccat
accaaatggttagtgaagaagaagaaagtgatgccaaggagtgagccaaatttaaatcct
agggcagcaatggctcctgttgtatccaaaaggaaagctatgcaagctacaaccacaaag
ctgatcaatagaatatggggagagtattactcaaaccacttgccggaggatttgaaagaa
ggaactaatagtgaagtaaaggatgatgatgaagtcgatgaacaagaacaggaagagaat
gaagatgtggatgcggatgaggaggagacagtactgttggagggaacacaaaagccacac
tcagtttccaaagaaactaaagcattttctgatgaaagagaaattagatgggaaggggct
cctgaagggaagaccagttccggatgccttctttataagcaggcaattattcatggtgaa
attgtttctgttggaatatctgtgtcagttgaagttgatgaatctgatgaacttcctgat
atatattacattgaatatatgtttgaagcaaagaatgggagaaaaatgtttcatggtagg
atgatgcagcatggttgtcagactgttcttggcaacgctgccaatgagagagaggtgttt
ttgactaatgagtgcagggatttgggacttcaggatgttaagcagacaaatgttgtaagt
atccgaaaaatgccttgggggcatcagtatcgaaaggataatattgttgtggataaactt
gatagggagagggcagacgaaaggaaaaagaaaggactatctactgaatattactgtaaa
agcttgtactggcctgaaagaggtgctttcttcggccttccatttgataagctgggtctc
gggtctggcttttgtcaatcttgcaagttagaggaagccgaaaaagagaaacagattttc
aaagtaaattcatcaaagtctacttttgtattggagggaaccgaatattctctcaatgac
tatgtttatgtcagtccttttgaatttgaggagaggatagagcaggggactcataagagt
gggaggaatgtagggttgaaagcttatgttgtgtgccaagtgcttgagatcattgtcaaa
aaggaaacaaaacaagctgaaataaaatctacagagctcaaagtcagaagattcttccga
ccagaagatgtatcaagtgagaaggcatactgctctgatgtacaagaggtgtattacagt
gatgaaacatatacaatctctgtacaatccatagagggtagatgcgaggtcaggaaaaag
attgatgtccctgaaggatgtacccctggaggaatcttccataatgtctttttctgcgag
cacttgtatgatcctaccactggatccctcaagaagttgccagctaatattaaagtcaaa
tattctagtggacatacagctgatgctgcagctagaaaaaagggaaaatgtaaagaaggg
gatagcatttcagagcctgatcttgaaagaaaaacatcaaatgataaacggttagcaacc
ttggacatatttgcaggatgtggtggcttatcagaggggctgcaccagtcaggcgtttca
tcaactaaatgggctattgagtatgaagagccagctgggaatgcatttaaagccaatcat
cctgaagcattggtgttcattgacaattgcaatgttattcttagggctataatggagaaa
tgtggggacctagaagattgtatctcaactaccgaggctgcagaattggcctctaaactt
gatgagaaggatttgagtagtttacccttgcctgggcaagttgatttcattaatgggggt
cctccatgccagggtttctcaggaatgaatcgatttaacacaagcacttggagtaaagtc
caatgcgagatgatattagcattcttgtcatttgctgattatttccggccaaagtatttc
ctgttggagaatgtgaggaattttgtgtcttttaataaaggacagacgtttcgtttaact
ttggcatcacttcttgagatgggttatcaggtgaggttcggtatccttgaggctggagct
tttggcgtttcacagtcacgaaaaagggcattcatatgggctgcctctccagaagatgtg
cttcctgagtggccagaaccaatgcatgtcttttctgcccccgaattgaaaatcaaattg
tccgaaaatgtccagtatgctgctgtttgcagtactgcaaatggcgccccgttacgtgca
ataacggttagagataccattggtgaactcccagctgtcggcaatggagcctctaggaca
aatatggagtatcaaagtgatcctgtttcctggtttcaaaagaagattcgaggcaatatg
gctgtgctgaccgatcacatatcaaaggaaatgaatgagctgaacttgattcgttgccag
aaaattccaaagaaaccaggttgtgattggcgtgatcttccagatgaaaagataaaattg
tctaatggacaactggttgatttgataccatggtgcttgccaaacacagctaaaaggcat
aatcaatggaagggtctctttggcaggttggattggcaagggaatttcccaacttccatt
actgacccgcaacctatggggaaggtcggaatgtgcttccatccagaccaagatcgaatt
ctcacagttcgtgaatgtgcccgatctcaaggcttcccagattgctatcagttttctgga
aacattattcacaagcataggcagattggaaatgctgttcctcctcctcttgcatttgct
ttagggttgaaactcaaggaagcagtggacagggcacatagaccaaaaagtagtggatag
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integrated database retrieval system
