Trifolium pratense (red clover): 123913072
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Entry
123913072 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123913072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123913072
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123913072
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
HECT type E3
123913072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_2
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
123913072
NCBI-ProteinID:
XP_045819628
LinkDB
All DBs
Position
LG3:complement(23517139..23526954)
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AA seq
1887 aa
AA seq
DB search
METRSRKRAEASSAAPSSSSSSPKTRSNKRARVSSSSNSTSSATVATATATNTATTTTST
PARSANTRSRASRTKETLPPKNPTPMDSNNESGSGSRRDRRGKNLERDNSDKGKEKEHDV
RIREREAERGLALNVETGAGDEDDNDSDSGILRQNLTSASSALQGLLRKLGAGLDDLLPS
SGMGSSSHQSGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVL
VGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSL
QALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDFVMEA
VPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSSDKLDELCNHGLVTQAASLISNSSSGG
GQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNASVSPALS
RPPDQIFEIVNLANELLPPLPQGTISLPASTNFVKGPVIKKSPAGSSVQQEDTNGDVPEI
SAREKLLNEQSELLRQFGMDLLPVLIQIYGSSVNIPVRHKCLSVIGKLMYFSEAEMIQSL
LSVTNISSFLAGVLASKDSHVLLPALQIAEILMEKLPETFSKMFIREGVVHAVDQLILPG
NSTIVSSAEKDNDSTPGASSRPRRNRRRSGNSNPDGNSLEDIKSPVSVNVGSPPSSSNIP
TVNSSIRLSVSAAAKTFKDQYFPSDPGAVVGVTDDLLHLKNLCMKLNAGVDDQRTNGKGK
SKTSGFGMEECLIGIISDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFAKDKPSET
HLPKLRKQALSRFKSFITVALPATIDNKDVTPMTVLVQKLQNALSSMERFPVMLSQAPRS
SSGSTRLGLSALSQPFKLRLCRAQGEKSLKDYSNNVVLIDPLASLAAIEEFLWPRIQRSE
SVQKSTAPAGNSESGTSPAGAGVPPPSTSTPSTTRRHSTRSRPSASLGDTPKKELSQDKT
SSSSKGKGKAVLKPAQEEGRGPQTRNAARRRAALDKDVQMKPANGDSTSEDEDLDISPVE
IDEALVIEDDDEISDDEDDDHEDMLRDDSLPVCVPDKVHDVKLGDSAEESTVTPATNEGQ
TNAASGSSSKVGSVRGSDTTDFRGGYSSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRQG
RPLFGSSSDPPKLIFTAGGKQLNRQLTIYQAVQRQLVLDEDDDERFAGSDFVSNDGSRMW
GDIFIINYQKADSQTDKASPVGPSSNTSKSTKSGSVSNCSSDVKLHQSSVVDSILHGELP
CELEKSNPTYDILALLRVLEGLNQLAPRLRAQVATDSFAEGKFLDLDELVVATGSKVPPE
EFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFYSTAFGLSRA
LYRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEY
FGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSGSDQMEIDGDEKKKKSSEGNIARDGELV
QAPLGLFPRPWPANADASEGSQLFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVI
GQDLDLHDILYIDAELGKTLQELNALVCRKHNIESIGGGYSGAVANLHYRGAPIADLCLD
FTLPGYPDYTLKPGDEIVDLNNLEDYISMVVDATVKIGITRQLEAFRAGFNQVFDISSLQ
TFTPHELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQ
FVTGAPKLPPGGLAVLNPKLTIVRKLSSTAAHTTSNGNGPSETADDDLPSVMTCANYLKL
PPYSTKEIMYKKLMYAINEGQGSFDLS
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagtcggaagcgggcggaggcttcctcagctgccccttcatcttcttca
tcaagtcctaaaactcgttccaacaaacgcgctcgtgtttcttcttcttctaattctaca
tcttccgctaccgtagccacagcaacagccaccaacacagcgacgacaacaacatccact
cctgctcgttcagccaacactcgttcccgcgcatcaagaacaaaggaaactttacctcct
aagaatccgactccgatggactccaacaatgaatcaggctctggctctagacgtgatcga
cgtggtaagaatttggaaagggataattccgataagggaaaggagaaagagcatgatgtt
aggatcagggaaagagaggccgagagaggtttggctttgaatgtggaaactggtgctggg
gatgaagatgataacgatagtgacagtggtattttgcgtcagaatttaacatctgctagc
agtgcactacaaggtcttcttcgtaaactcggtgctggtttggatgatctgctaccgtca
tccgggatgggttcttcgtctcatcagagtgggaggttgaagaagatcctgtttgggtta
cgagctgatggagaagaaggtcgacaggttgaagctttgacacagctttgtgaaatgctt
tctattgggactgaggattcgcttagtactttctctgttgattcgtttgtaccggtgctc
gtggggttgctgaatcatgagagtaatcctgatattatgcttcttgctgcaagggcgcta
acccatctctgtgatgtgctcccttcgtcttgtgctgctgttgtgcattatggagctgtt
tcaatcttctgcgcgaggttgctcactatagagtatatggacttagctgaacagtccctt
caagctctaaagaagatatctcaggagcacccaactgcatgcctacgagctggggctctc
atggccgtactctcttatctggacttcttctcaactggagttcagcgtgttgcattgtct
actgctgcaaatatgtgcaagaagcttccttcagatgcatctgactttgtgatggaagct
gttcctcttttgacaaacctccttcagtaccatgattcaaaggtcctggagcatgcatct
gtttgtttgactcgaatagctgaagcatttgcatcatcttcagacaaattagatgaatta
tgcaatcatggactggtaacacaagctgcctccctcatttctaacagcagttctggaggt
ggacaggcttctctcagtacgccaacatatactggtttaatccgacttctttcaacatgc
gcaagcgggtcccctcttggagctaaaactctgcttctgcttggaattagtggtattctt
aaagacattctctctggttctggagtttcttctaatgcctcagtttctcctgcattaagc
aggccaccagatcagatatttgagattgtgaacctggcaaatgagcttctccccccattg
ccacaagggactatttccctccctgccagcaccaactttgtgaagggtccggttataaaa
aagtctcctgctggcagttctgtgcaacaagaagacacaaatggagatgttcctgagata
tcggctcgtgagaagctattaaatgaacagtctgagctgcttaggcaatttgggatggat
ctcctcccagttttaatacagatttatggttctagtgtcaatatacctgttcggcacaaa
tgtctttcggtcattggaaagttgatgtatttcagtgaagcagagatgatccagtctttg
ttaagcgtgacaaatatatcaagtttcttagctggagtcttggcatcaaaagattcacat
gtattgctacctgccttgcaaattgccgaaattcttatggaaaagctgcccgagacattc
tctaagatgtttatcagagaaggtgtcgtccatgctgtggaccaacttattttgcccgga
aattcaacaattgtctcttcggcagagaaggataatgattctacgcctggagcatcttct
cgccctaggcgtaataggcgacgctctggaaactccaatcctgatggaaattctttggaa
gatatcaagagtcctgtttcagtaaatgttggttcacctccaagttcgtcaaatattcca
acagtaaattctagtatccggttatctgttagcgcagctgcaaaaacttttaaagatcag
tactttccttcagatcctggggctgttgtgggtgttactgatgatcttttgcatctgaaa
aatctttgcatgaagttaaatgctggtgttgacgaccaaagaactaatggtaaggggaaa
tctaaaacttctggatttggtatggaggagtgtctaattggcatcatatctgacatgcta
aaggaacttggcaaaggagatggtgtatccacttttgaatttattggtagcggtgttgtt
gcagctttgctgaattatttttcttgcgggtattttgctaaagataaaccctcagaaacc
cacctacctaagcttcgcaaacaagcactttcaaggtttaagtcatttattactgttgca
ctgcctgctactattgacaataaggatgtaactcctatgactgtcttggttcaaaaactt
caaaatgctttgtcctccatggagcgtttccctgttatgctgagtcaagcaccaaggtca
tccagtggaagtacacgcctcggactaagtgcattatcccagcccttcaaattgcgtctt
tgtcgagcccagggggaaaagtcacttaaggattactcaaacaatgttgtattgattgat
ccattagctagtttagcagccattgaggaatttctttggcctcgtatccagcgaagtgaa
tctgttcagaagtccactgcacctgctgggaattctgaatctgggacaagtcctgcagga
gctggtgttccacctccttctacctctaccccgtccactacccgtcgtcattctacgaga
tccagaccatctgctagtttaggggatacccccaaaaaagagttatctcaagataaaacc
tcgagctcatctaagggtaagggaaaagctgtattaaagcctgcacaagaggagggaaga
ggacctcaaaccaggaatgctgcacgcagaagagcagctcttgataaagatgttcaaatg
aagcctgcaaatggggattctacttctgaggatgaagatttagatatatctcctgttgaa
attgatgaggctttggtcatcgaagacgatgatgaaatttctgacgatgaggatgatgac
catgaagacatgctgagagatgactcccttcctgtttgcgtacctgacaaagtacatgat
gtgaaattgggtgactcagctgaggagagtactgttactcctgcaactaatgaaggacag
actaatgcagcttctggttctagtagcaaagttggttcagtaaggggatcagacactaca
gattttaggggtggctattcttctagctctcgaggtgcaatgtcatttgctgctgctgcc
atggctggacttggatctgccaatagcagaggaatcaggggtggcagagatcggcaaggg
cgtccattgtttggtagttctagtgatcctccgaagttaatattcactgctggtgggaaa
caactgaacaggcagctgactatttatcaagcagttcaaagacagcttgtactagatgaa
gatgacgatgagagatttgctggcagtgactttgtgtctaacgatggaagcaggatgtgg
ggtgacattttcataataaattatcagaaggcagacagccaaacagataaggcttcccca
gtaggcccaagttctaacacttcaaaatctactaaatctgggtctgtatcaaattgcagt
tctgatgtcaaactgcatcagtcatctgtagtagatagtatcttacatggagaattgcct
tgtgagctagagaaatctaatccaacatacgacatattggctctattacgtgtgctggag
ggtttgaaccagcttgcacctcgtttgagggcccaagtggctaccgatagttttgctgag
ggaaaatttttggatctagatgagctagttgttgccacaggttctaaggttcctccagag
gaatttataagcagcaagcttactccaaaattagctaggcagatacaagatgcccttgcc
ctatgcagtgggagtcttccctcatggtgttatcagttaactaaagcgtgcccttttttg
tttccatttgagatccgaagacaatacttctattcaactgccttcgggttatctcgtgca
ctgtatcgactccaacagcagcaaggtgccgatggtcatggatcaacaaatgaaagagag
gttagggttggaagactgcagcgccaaaaggttcgtgtctctcgtaaccgcattttggat
tccgctgctaaagtgatggaaatgtattccagccaaaaggctgtacttgaagtagaatat
tttggtgaagttggcactggccttggtccgacccttgagttctatacacttctaagtcac
gacttacaaaaagttggacttcagatgtggagatcaggttctgatcaaatggaaattgat
ggagatgaaaagaaaaagaaaagcagtgaaggcaatattgctagagatggggaacttgtt
caagctcctcttggtttgtttcctcgtccctggcctgcaaatgctgatgcatctgagggt
agccagctttttaaagtgattgaatatttccggcttttaggccgcgtagttgctaaagca
cttcaagatggacgtctattagatttgccattatctgtagcattttataagcttgttatt
ggtcaagatcttgatttgcatgacattctttacattgatgctgaacttgggaaaactttg
caagagttgaatgcccttgtttgccggaaacataatatagagtctattggtggtggttat
tccggtgcagtagccaatttgcattaccgtggagctccaattgcagatctctgtttggat
tttacccttcctggttatccagattacaccttgaaacctggggatgaaattgttgacctc
aataatctagaggattatatatccatggtcgttgatgccactgtcaagattggaataacg
cgccaactagaagcctttagagcagggttcaatcaggtttttgacatctcatctttacaa
acatttacgcctcacgaattggattatttgctttgtggccgtagagaattgtggaagacg
gagacactagctgatcatataaaatttgaccatgggtatactgccaaaagccccgcaata
gtgaatttacttgaaattatgggagagttcacaccggagcagcagcgtgccttctgtcaa
tttgttactggagcacctaagctaccgcctggtggactggctgttctaaatccaaaatta
acgattgtgagaaagctctcgtcaactgccgctcatacgacatccaatgggaacggacct
tcagaaacagcagatgatgacttgccaagtgtgatgacgtgtgcaaattacctgaagctt
cctccttattctaccaaggaaattatgtacaagaagctaatgtatgcaatcaatgaaggc
cagggatcctttgacttatcatga
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