Trifolium pratense (red clover): 123913352
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Entry
123913352 CDS
T08949
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00450
Selenocompound metabolism
tpra00970
Aminoacyl-tRNA biosynthesis
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
123913352
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123913352
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123913352
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123913352
Enzymes [BR:
tpra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
123913352
Amino acid related enzymes [BR:
tpra01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123913352
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
123913352
Prokaryotic type
Other AARSs
123913352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
123913352
NCBI-ProteinID:
XP_045820024
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All DBs
Position
LG3:26638360..26649336
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AA seq
810 aa
AA seq
DB search
MTEDRKVPKLPVEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRDYNAIYI
CGTDEYGTATETKALEENCSPKEICDKYHVIHKDVYDWFNISFDEFGRTSAPEQTEVCQA
IFKKIHENNWLSEDTLQQLYCDTCKKFLADRLVEGTCPIPGCEYDSARGDQCEKCGNLLN
PTELKIPRCKVCRNSPRICDTDHLFLELPLLKDKLEKYINEMSVVGSWSQNAIQTTNSWF
KMGLKKRCITRDLKWGVPVPHEKYSDKVFYVWFDAPIGYISITASYTRDWEKWWKNPENV
ELFQFMGKDNVPFHTVMFPSTLLGTGQNWTLMKTISVTEYLNYEAGKFSKSKGIGVFGND
AKDTNIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKLNTELLNNLGNYVNRVLSFIAKPEG
QGYNSIIPTVPDDVSGDSHDPTKKLANKVAAYLEQYIEAMEKVKLKQGLKIAMSISGEGN
AYLQETEFWRLYKQNQSLCSLVMKTAAGIVYLLACLLEPFMPSFSLEVFKQLNLSVETHL
SLSDDKGDVDRARRPWDLLSAGHKIGTPKPLFRELKDEEVEFFRKKFEGSQADRIIRAEA
EAAENVAEQLKKTKVSADGNGKKKSAAKSSAESSNKAKNKAAAEPDITITRLDIRVGVIK
KAEKHPDADSLYVEQIDVGEEQTRTVVSGLVKYIPLDEMQNRKVCVLCNLKPATMRGIKS
QAMVLAASNDDHTKVELVEPPSSASVGERITFPGHEGDPDDLLNPKKKVWETLQVDLHTN
EKLEACFKNIPLTTSAGICTVSSISNGSIR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagatcgtaaagttcccaagcttcccgtcgagggaaagcgcaatatcctcatc
accagtgctttaccatacgtcaacaacgttcctcatctcggcaacatcattggatgtgtg
ttgagtgctgatgtttttgctcgctactgtcgactaagggattacaatgctatatacatc
tgcggtactgatgagtatggtactgcaacggagactaaagcattggaagagaattgctct
ccaaaagagatttgtgacaaataccatgttattcataaagatgtgtatgactggttcaat
ataagttttgatgaatttgggcgtacttctgcacctgagcaaactgaagtctgccaagca
attttcaaaaagatacatgaaaacaattggctctccgaggacacattacagcagctttac
tgcgacacatgcaaaaagttcttagctgatcggcttgtggagggtacatgcccaattccg
ggatgcgagtatgattctgcccgaggagaccaatgtgagaagtgcggtaaccttctaaat
ccgacagaattgaagattcctaggtgcaaggtttgtcgaaatagtcctcgtatttgtgat
acggaccacttatttcttgagctccctctattgaaagacaaattggaaaagtacatcaac
gagatgtccgtggttggatcatggagtcagaatgctattcaaacaacaaattcatggttc
aaaatgggattaaagaaacgttgtattactagagatctgaagtggggggttcctgttcca
catgaaaaatacagtgacaaggttttctacgtttggtttgatgcacctattggatatata
tcaatcacggcaagctacacacgtgattgggagaaatggtggaaaaatccggagaatgtg
gagttgtttcagtttatgggaaaggacaatgtgccattccacactgtaatgtttccatct
actctgctcggaaccggtcaaaattggactttaatgaagactattagtgttactgaatac
ctgaattatgaagcagggaagttttctaagagcaaaggcatcggggtatttggtaatgat
gcaaaagatactaatattccagttgaagtatggagatattacttgctcacaaataggcct
gaggtatcagatacactttttacgtggtctgacttgcaagcaaaattaaatacggagttg
ctcaataacttgggaaactatgtcaaccgagttttgagttttattgccaagcctgaaggt
caaggatataattccattattcctaccgttcctgatgatgtaagcggtgattcccatgat
ccaaccaaaaagttggccaacaaagttgccgcatatttggagcaatacatagaagcaatg
gagaaggttaaactaaagcaaggattgaaaattgcaatgagcatatccggcgaggggaat
gcatatttgcaggaaactgaattttggcgcctttacaagcaaaaccaatctctctgctcc
cttgttatgaaaactgctgccgggattgtatatcttcttgcttgtttattggaacccttc
atgccatctttcagtcttgaggtattcaagcagctaaatttgtctgtggagacacatctt
tccctttctgatgataaaggagatgttgatagagcaagaagaccctgggatctccttagc
gctggtcataaaattggaacgccaaagccattgttcagggaactgaaagatgaggaagtg
gagttcttcaggaagaagtttgaaggaagtcaagctgataggattatacgtgcagaggcc
gaagctgctgaaaatgttgctgagcaattgaagaaaacaaaagtttcagcagatggcaat
gggaagaaaaaatcagcagcaaaatcatcggcagaatcatcaaataaagcaaaaaacaag
gctgctgctgaaccagatattaccatcacaaggcttgatattcgggttggggtcattaaa
aaggctgaaaagcatcctgatgcagattcactatatgttgaacagattgatgttggtgaa
gaacagacaagaactgtcgtcagtgggcttgtcaaatatataccacttgacgaaatgcag
aatcgaaaggtttgtgttctttgcaacctaaagccagcaaccatgaggggcattaaatcc
caagcaatggttcttgctgcttccaatgatgatcacaccaaggttgaattggttgaacca
cccagttctgcttctgttggtgagagaattacattcccaggacatgaaggcgatcccgat
gaccttttaaacccaaagaagaaagtctgggagacattgcaagttgatctgcacactaat
gagaagctagaggcatgcttcaaaaatattccactcaccacatcagctggtatttgcact
gtttcatcaataagcaatgggtcaataaggtag
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