Trifolium pratense (red clover): 123913534
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Entry
123913534 CDS
T08949
Name
(RefSeq) neutral ceramidase 1-like isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00600
Sphingolipid metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123913534
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
123913534
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
123913534
NCBI-ProteinID:
XP_045820262
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Position
LG3:complement(42369977..42376830)
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AA seq
780 aa
AA seq
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MEFHTFCDLNVWRVCGKMRIWTVLLLFLLLKSDVNVVYCGSDYLVGLGSYDITGPAADVN
LMGYAKTEQLASGIHFRLRSRAFIVAASKGNRVVFVNLDACMASQIVTIKVIERLKARYG
DLYTENNVVISATHTHSGPGGYLQYFVYIITSYGFVRQSFDVIVDGIEKSVVQAHENLRP
GSIFVDKGELLDAGVNRSPSAYLNNPASERSKYKYDVDKEMTLLKFVDDEWGPVGSFNWF
ATHATSMGHKNSLISGDNKGAASRFMEDWFERKDSGRMDSDILGNDGSPQRISNIIPGLR
DNHHELLELAVSFQSPPGRPTTKTSSVTKRVRGAPRNVDKPRFVAAFCQPNSGDVSPNVL
GAFCLDTGLPCHFNHSTCGGRNELCYSQGPGYPDEFESTRIIGERQFKKAVDLFNAADEE
IKGEVDFRHTYIDLSKLEVTISDQGADKVVKTCPAAMGFASAAGTTDGPGSFDFKQGDNK
GNPFWKLVRNLVKTITRKQIDCQHPKPILLDTGEMNVPYEWAPSILPIQILRVGQFVILC
IPGEISTMAGRRLRDAVKTILSSHKDFENVHIVITSLSNAYSQYATTYEEYYVQRYEGGS
TLYGPHTLSAYIQEFKKLAKALISGQPVKPGPLPPNLLNKQVSLLPPVVVDGTPFGVNFG
DVYSDVPQNSAFKSGDIVSASFWSACPRNDLMTEGTFALVEFLQGKDTWVPAYDDDDFCL
RFKWSRRFKLSPMSKATIEWRIPQGVTHGVYRISHFGAAKGLFGSINHFTGSSSAFVVVA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcatactttttgtgatttgaatgtttggagggtatgtggaaaaatgagaatt
tggactgttttattactttttttgctactgaagagtgatgttaatgttgtgtattgcggt
tcggattacttggttggtcttggaagctatgatattactggtcctgctgctgatgttaat
ttgatggggtatgctaaaacagaacagcttgcatctggtattcacttcaggttacgatct
cgtgcttttattgttgcagcgtcgaagggtaatagggttgtgtttgtgaaccttgatgct
tgtatggcttcacaaattgtgacaattaaagtaattgagaggctgaaagcaagatatggt
gatctatataccgaaaataatgtagttattagtgcaactcacactcattctggtcctggg
ggttatcttcaatattttgtgtatattataacatcgtatggatttgtgcgtcagtccttt
gatgtaatcgttgatggcattgagaaaagcgttgttcaagctcatgaaaatctccgtcca
ggatcaatatttgttgataaaggagagctcttagacgcaggtgtgaatcgcagtcctagt
gcttatctcaataatcctgcttcagagagaagcaagtacaagtatgatgttgataaagaa
atgactcttttaaagtttgtcgatgatgaatggggacctgttggaagcttcaattggttt
gctactcacgcgacttcaatgggtcataaaaactcgttaatcagtggggataataaaggc
gcggcttcacggtttatggaagattggtttgagagaaaagattctggaagaatggattct
gatatactcggaaacgatggctcgccccaaagaatctcaaatataattcccggacttcgt
gataatcatcatgaattactggaacttgctgtctctttccagtctcctcctggtcgacca
acaaccaaaacttcaagtgttaccaaacgggtgagaggtgctcctaggaatgttgacaag
cctagatttgtagctgcattttgtcaaccaaattctggagatgtcagtccaaatgttctt
ggagctttttgtttagacactggattaccttgtcacttcaatcacagtacatgtggaggg
aggaatgaattatgctatagccaaggacctggttatccagatgaatttgaaagtactcgc
attataggggaaagacaatttaaaaaagcagtggatcttttcaatgcagcagatgaagag
attaaaggggaggttgattttcgacatacctatatagatttatccaaacttgaggtaact
atttctgatcaaggagccgacaaggttgtaaagacatgccctgctgcaatgggttttgca
tctgctgccggaacaacagatggacctggatcttttgattttaagcaaggggataataag
ggaaatcctttctggaagctagtccgcaacctagttaagacaataaccaggaaacaaata
gattgtcagcacccaaagccaattttgcttgatactggtgaaatgaatgtaccatatgag
tgggcaccttcaatacttccaattcagatccttcgagttgggcagtttgttatactttgt
attccaggagaaatctcaacaatggctggaaggcgactacgtgatgcagtgaagacgata
ctaagcagtcacaaagattttgaaaacgttcatattgttataacatcattgagcaatgct
tattcacagtacgcgactacatatgaagaatactatgtgcaaagatatgagggtggttct
acactatacggcccacacacactgagtgcatacattcaagagtttaagaagcttgcaaaa
gctctcatcagcggccaaccggtaaaacctggcccactaccccctaatctcctcaataag
caagtaagcttgctaccaccagttgtggtggatggaactccttttggagtaaattttggc
gatgtttactctgacgtacctcagaactccgcctttaagagtggtgacattgtgtcagct
tcgttctggtctgcgtgccctcgaaatgaccttatgactgaaggcacctttgcactggtg
gaatttctccaaggaaaagatacttgggttcctgcttatgatgatgatgatttctgtctg
cggtttaagtggtcaaggcgttttaaactcagtcctatgagtaaagcaaccatagaatgg
aggataccacagggtgttactcatggtgtgtacagaataagtcactttggcgctgcaaag
ggcttatttggatcgattaatcactttacaggttcatctagtgcatttgttgtagtagca
taa
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