Trifolium pratense (red clover): 123913556
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Entry
123913556 CDS
T08949
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123913556
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
General mRNP proteins
123913556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
123913556
NCBI-ProteinID:
XP_045820291
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All DBs
Position
LG3:complement(8132069..8138036)
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AA seq
558 aa
AA seq
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MDFDEYEYLEKTVEDLPEDKDSSKKKKTDSADTKSERTYRKRDVDDDLNGEDRRSKRSRG
DDENGSKKDRDRDRDRERERSSGRHRERERDGERGSREKEREKDGERGGRDKERDKEREK
ERERRDKEREKERERREKEREREKEEKERPRRSSSRPERDRGERVERERDFENRDGRRFR
DKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV
GYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAGVVGPYGAVDRK
LYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLN
GKLDIAGRTIKVSSVTDHVGSQDTTAKSADFDDDEGGLTLNAHSRALLMQRLAGADVPTS
IVNGSVPVQQAFNFPIGNPGGIPTPGLPQIMPTPVVEPVGIPSECLLLKNMFDPSTETEP
DFDIDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLQFETVEASSAAQRAMHMRWFARRLI
TAIFMEPHLYEAKFKGEL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtacttggagaagacggtggaggacctaccggaagacaaa
gattcatccaaaaagaagaagaccgacagcgccgacactaaatccgagagaacttaccgg
aaacgcgacgtcgacgacgatctaaacggagaagacagacgtagcaagaggtcacgcggc
gacgacgagaatggctctaaaaaggatcgcgatagagatagagaccgtgaacgtgagaga
tcttccggcaggcatagagagagggagagagacggagagagaggtagcagagagaaagag
agggagaaggacggagagagaggtggtagagacaaagagagggataaagagagagaaaag
gagagggagagaagagataaggaaagggaaaaggaacgggagagaagagagaaggaacga
gagagagaaaaggaggagaaagagagaccaaggaggagttcgagtcgtcccgagagagat
agaggagaaagagttgagagagagcgagattttgaaaatagagatggcaggagattcagg
gataagaaagagaatgtggaacctgaggcagacccagaaagggatcagagaactgttttt
gcttaccagatgcctttaaaagcaacggagagagatgtatacgagttcttctcaaaagct
ggcaaggtgagagatgtccgtctgatcatggataggaactcaagacgatctaaaggagtt
gggtatattgaattttatgatgcaatgtcagtgccgatggcaattgctctctccggacaa
ctacttcttgggcaacctgtaatggtgaaaccttctgaggcggaaaaaaatcttgttcaa
tctaatgcttccagtggagctgctggtgtagtaggaccatatggagcagtggacagaaaa
ttatatgtggggaatcttcacttcaacatgaccgaggctaatctccgagagatttttgag
ccatttggtcagattgaagttgtacaactgcctcttgacatggagacaggacactgcaag
ggttttgggtttgtgcaatttgcccatctcgaacatgccaaggcagctcagagtttaaat
ggaaaattagatattgctggcaggactataaaggtttcatctgttacagatcatgttgga
agtcaagatacaactgcaaaatctgcagattttgatgatgatgaaggtggattgacttta
aatgcccactcgagggcattgcttatgcaaaggttggctggtgctgacgttcccacaagc
attgtgaatgggtcggttcctgttcagcaggcttttaactttcctattggtaacccaggt
ggtatacccacaccaggtctaccacaaattatgcctactcctgtggttgaaccagtagga
atccccagcgagtgcttattattgaagaatatgtttgatccaagcaccgagacggaacca
gatttcgatatcgacattaaagaggatgtagaggaagagtgttctaaatacggacgggtg
aagcatatttatgttgacaaaagaagtgcaggttttgtgtacttgcagtttgaaacagtg
gaagcatcaagtgctgcgcaacgagcaatgcacatgagatggtttgcacgcaggttgatt
acagctatcttcatggaaccacatttatatgaagccaagtttaagggggaattgtga
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