Trifolium pratense (red clover): 123913571
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Entry
123913571 CDS
T08949
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123913571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123913571
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123913571
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123913571
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123913571
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
123913571
Messenger RNA biogenesis [BR:
tpra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
123913571
Chaperones and folding catalysts [BR:
tpra03110
]
Heat shock proteins
HSP60 / Chaperonin
123913571
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
123913571
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123913571
Exosomal proteins of other body fluids (saliva and urine)
123913571
Exosomal proteins of breast cancer cells
123913571
Exosomal proteins of colorectal cancer cells
123913571
Exosomal proteins of bladder cancer cells
123913571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
123913571
NCBI-ProteinID:
XP_045820343
LinkDB
All DBs
Position
LG1:complement(10821004..10825645)
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARIARNSTHQIGSRVAWSRNYAAKEIKFGVEARALMLKGVEELAEAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMEKVGKEGVITIADGKTLDNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISSINSIVKVLELALKKQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITEELGLNLEKVDLDVFGSCKKITISKDD
TVILDGAGDKKSIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASNELSKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKDDKDGPAMPGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgatttgcttcttcccttgcctccaaagctcgaattgctaggaatagcactcat
cagattggaagtagagtggcatggagtagaaattatgcggcaaaagagatcaaatttggt
gtggaggctcgagctttgatgcttaagggtgttgaagagcttgctgaggcagttaaagta
accatgggtcctaagggccgtaatgtggttatcgagcaaagttttggtgcccctaaagtg
acaaaagatggagtaacggttgctaagagcattgaattcaaggataaagtcaagaatatt
ggtgccagtcttgtaaagcaggttgcaaatgctaccaatgatgtggctggtgatggaacc
acttgtgctaccgttcttacccgagcaatatttacggaagggtgcaaatcagttgcagct
ggaatgaatgcaatggacttgaggcgaggtataaacatggctgttgatgctgttgtgaca
aacttgaaaagccgagcaaggatgattagcacttccgaagaaatagcccaggttgggaca
atatctgctaatggtgacagagaaattggtgagttgattgcaaaagctatggagaaagtt
ggcaaagaaggtgtaatcacaatcgccgatggcaagacattggacaacgagttggaagtt
gttgaaggaatgaagcttgaccgaggctacatttctccatatttcataacaaaccagaag
aatcagaaatgtgaacttgaggatcccctcattataatccacgagaagaaaatctcaagt
attaattccatagttaaagtattagagttagctttgaagaaacaaagacctttattgatt
gttgccgaggatgtggaaagtgatgcacttgcaactcttattctaaataagcttcgtgct
ggaatcaaggtatgtgcgatcaaagcccctggttttggtgaaaaccggaaatctggtctc
caagatcttgctgttcttaccggaggtcaacttatcaccgaagagcttggcttgaatctt
gaaaaagttgatcttgacgtgtttggctcttgcaaaaagattacaatttccaaagatgac
actgtcattcttgacggagctggtgataagaaatcaattgaggaaagatgtgagcagatt
aggtcagcaatcgaaaatagcacttcagattatgacaaggaaaagttacaggaaagatta
gccaagctttctgggggtgttgcagtgcttaagattggaggagccagtgaggctgaagtt
ggtgagaagaaggatagagtgacagatgccttaaatgcaaccaaggcagctgtagaggag
ggcatagtacctggtggcggtgttgctcttctttatgcatcaaatgagttaagtaagctt
caaactgccaacttcgatcagaaaataggtgtccaaattatccaaaatgctttgaagaca
cctgtgcacacaattgcatcaaatgctggagttgagggtgctgttgttgttggtaaacta
ttggaacaggataatcccgaccttggctacgatgccgccaaaggtgaatatgttgatatg
attaaatccggaataattgatccgttgaaggttattagaaccgccttggttgatgcagcc
agtgtgtcatctttgatgacaacaactgaagctgttgtgtctgaactcccaaaggacgat
aaagacggtcctgccatgcctggcggcatgggcggcatggattattag
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