Trifolium pratense (red clover): 123913588
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Entry
123913588 CDS
T08949
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123913588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123913588
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123913588
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
123913588
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123913588
Exosomal proteins of other body fluids (saliva and urine)
123913588
Exosomal proteins of colorectal cancer cells
123913588
Exosomal proteins of bladder cancer cells
123913588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
GDH_C
Motif
Other DBs
NCBI-GeneID:
123913588
NCBI-ProteinID:
XP_045820333
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All DBs
Position
LG3:complement(16663746..16665746)
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AA seq
209 aa
AA seq
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MEVKLWNDKREREMYDNFAELYAIIKATERLEKAYVRDIITPQEYEMECQKLIAHFKTLA
STLKDTVPSIERFADTYRMECPAAINRLVVSGVPATVEHRATAAAGASTSAAIVAECVQN
FITSMDSLKLNMVAVDQVHPLLSDLNGSLNKLTILPPDFEGKIKMKDWIARLSKMGAADE
LTEQQARQLHFDLESSYNSFMAALPNAGT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaagctctggaatgacaagcgcgagagagaaatgtatgataattttgctgag
ctttatgccattatcaaggctactgagagactcgagaaagcatatgttagagatataatc
acaccgcaggaatatgagatggagtgccagaagcttatagctcatttcaaaaccctagct
tctactcttaaggacactgtgcctagcattgagagatttgctgatacttataggatggag
tgtccggctgcaattaaccgtcttgtggtttctggtgtgcctgctacagtggagcaccgg
gctactgctgcagcaggtgcatccacctcggctgctattgtggctgagtgtgttcagaat
tttattacatcgatggattccttgaaacttaacatggtggctgtggatcaggtgcatcct
ttgctctcagaccttaatggttcactcaataaattgacgattttgccacctgattttgag
gggaaaataaaaatgaaggattggattgcaaggttatcaaagatgggtgcagctgatgag
ttgacagaacaacaggcccggcagcttcactttgatctcgagtcttcttacaattccttt
atggcagctctgcccaatgctggcacttga
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